Bactrocera oleae (olive fruit fly): 106622561
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Entry
106622561 CDS
T07646
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106622561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106622561
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106622561
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106622561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
CNOT1_1st
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
106622561
NCBI-ProteinID:
XP_036218793
LinkDB
All DBs
Position
Unknown
AA seq
2480 aa
AA seq
DB search
MNQLKFTLAQIGILVKQLNKKNFAETSESINQYIKETGLEADRHCLRCLFSVINFTDTIS
TSPNSNYNFIVEAQSRLLGAQLENQLTRASFISNICFAVDHCFPQQKSLKPTPQLIAQIT
QLTGISKLCEVVLSLALTHSSQADVRQYSLEHLKVSFTELIESFLGNKDNSIAEKCDLQD
VSVDILQLLLVCIDEVVSTELKNKFLDLLREQYPLERVPLILSPHLYRKTLNCVKTTECS
DPSALLPLEDTELIYNKQHDTPIADGGTVSQHLTEIGIEDIYDNLCETIFTTQLNNNIMD
TSWINLILEIGYEFTSSVEECKNHLRCGSRELQSQDVAKIIGLMCRRHSSLLDCNVNLGT
PANFWPGQPGTGPNPQQQNVANNNDGSNVTGSGVDKTTNLNDKKDKVGGNPVGTISTETT
QAWKPDVFVQALKEVVPQLNWKEVCLELDHPEFILKDRIGLDLLLTIFRLGTQSALFPHP
ECIYRHWQNVNGQLSLIAVMLKNPDLFTFSDYIFTAAPVEMLKTPPDTDNKEVCAWKSLH
LVEVLLYIADQGFYHQVIELFKFPAQHCPDILFLSLLHINPPITALRQELFSQLIPTFLA
NHPNSGVILLNAWNSANFGVILRPIIMQSMSDWYQRGTEYDQVKLSRILDVAQDLKALST
LLNERSFLFVIDLACLASRREYLKLEKWLSDKIREHGEPFIQAILKCLQRRCPQITNAKI
PESQLPSKQAQLPPETVTTMLQCLQGCIGNVPPEIVDLIMQMTANCSIMANKARAAVPPL
VPQLQGVMRGHRGMDMGGVPGVPPPPFSANLNAQQMFGPTMDTLSNLTTNIANLNLGGPN
GAFNFGNVLGNLASTPASPSRLMNPAASPYPLNAMQIPPPNVGNLGRMPQAAQQPTPTPP
NPINPGMADLQGPVSKEVEDEANSYFQRIYNHPPHPTLSIDEVLDILQRFKDSNIRREQE
VYQCMLRNLFEEYRFFPHYPEKELQITAQLFGGIIERNLVPSCVALGLALRCVLDALRKQ
DSKMYNFGITALDRFKNRLHSYNKYCEYIRSIAHFHEFPPHLIQYVECGYLQQEPPPAKI
QMLMAGSGQQPQPDSIYRSNSVTGNLVTTPTQQKPMVVAQSIHASRMKSIATATNIDTLL
VANQEEKVTIPPEPVQDKTAFIFNNLSQLNIPQKCEEIKEIMTKEYWPWLAQYLVLKRAS
LEFNFHSLYFNFLEALKNPEINKYVTKETLRNIKVLLRSDKGVVNFSDRSLLKNLGHWLG
MMTLGRNKPILQIELDLKTLLAEAYHKGQQELLFVVPFVAKILESSGKSKVFKTPNPWTM
AIMNVLGELHQEPELKLNLKFEIEVLCKTLNLDLQKLKPIVYLKDPSRSMNIEHQMAQPK
PKNIEAPPQQQQQQQPPSQGQTPGPGQMGPNDSDAQALLMGGGGSGVVGGANIPGGVVPS
PSISNESTGQVIMQAPEPRFSFVDINIANFHTIGQHVVLSPNITFLHANPGMKHIILNAI
ERTITEWLQPVVDRSVRIAVTTTEQIVRKDFGLDPDENRMRTAAHQMVRYLSAGMAMITC
KDSLSQTLTNNIRKAFLSALTGGPSYQDIEAAAIQLSNDNVELACAFIQKTAAEKSTPEV
DRRMATDFDTRKMTRDEGGRFYDTQTLAYQTERMPEQVRLKVGGIPHTQFAVYAEFARNI
PGFQPMTERDIALFLPKPQELPPATFGTDEMGLLYAELAAKMEAFLNSTMNISTLQLQAS
KIHALLNALMVTRRIRDNESALNLLTRVVEGLIEGLVNIPEHIEQMKLYRDIHLRILNML
QNTFGAGVTERAITKCIFDVREEVRYNVEAIKWLITSHFINVPQFDLLLREAMDNGNNYM
AVTFAMTLMERLLDGRTSATLETEMTGTFEMLGRLPQNRHRYPEATTHQIDMMDAGPFGG
ADRYLAGATQYMHSGMQHVRSNDCDDPPGLQEKTEFLLKDWVSIYNQSNNLSRETKIFTS
FVQKMNMYGILKTDDLITRFFRQATQICIDLVYRILNDPSNSPLQARTKIFHWIDAFVHL
IALLVRHSGEAGNPTTKINLLNKVLGIVLGILLQDQELHGTAFQQLGYHRFFVMLFLELS
SPDAVLESLMHSIMTAFSHTYHLLNPALAPGFCYAWLELISHRIFIGRILAQIPQQKGWP
LYSQLLLDLFRYLAPFLRNAELAKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDAIP
PNCIQMRNIILAAFPRNMRLPDPFTPNLKVDMLAETATAPKICSNYVFNIQPANFKKDLD
SYLKARAPVTFLSELRSHLQISNEPGSRYNIPLMNALVLYVGTQAISHIRSKNFVPNTSN
IAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQ
EQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEISRLFESVARSCM
VKSNHQPQINNMDGDIQEIN
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaactgaaattcacactagcgcagattggtattttggtcaaacaactgaacaag
aaaaattttgctgaaaccagcgaaagcataaatcagtatataaaagagaccggtttggaa
gcggaccgccattgtttgcgctgcctattctcggtgatcaattttactgacacgatatca
acaagtccgaattcgaattacaattttattgtagaagcacaatctagattactgggcgct
caattggaaaatcaactaactagagcgtcctttatatcgaatatttgctttgctgtcgac
cattgctttcctcaacaaaagtctcttaaaccgacaccacaacttatagcgcaaataact
cagttaacaggaattagtaaactttgtgaagttgtattgtcattagcattaacgcattcg
tcacaagcagatgtacgtcaatactctttggaacatcttaaagtatcattcactgagcta
attgaatcattcttgggaaataaagataacagcattgctgagaagtgtgatttgcaagac
gtatctgtagatatactacaattgcttcttgtttgtatagacgaagttgtaagcacagaa
cttaaaaataaatttttggatttattacgcgaacaatatccgcttgaacgagttcccctc
atactatcgccacatttgtatcgcaaaacacttaattgtgttaaaacaactgaatgtagt
gatccctcagcgttattgccactagaagacactgaattgatttataacaaacagcacgat
acaccgattgctgatggcggtaccgttagtcaacatttgacggaaattggtattgaagat
atttatgacaacttatgcgagacaatatttactacacagttgaataataatattatggac
acatcctggattaatttaatcctagagattggttacgaattcacatcaagcgttgaagaa
tgtaagaatcatctacgttgtggttcgcgcgaacttcaatcacaggatgtggccaagatc
attggtctcatgtgccgtaggcactcctcattactcgattgcaatgtgaacttaggaaca
ccggccaatttttggccaggtcagccgggaactggtcccaacccacaacaacaaaatgtg
gccaataacaatgacggcagtaacgttacgggcagtggcgttgataaaacaaccaactta
aatgacaaaaaagacaaagtcggtggcaacccagtcggaaccatcagcacagagaccacg
caagcatggaaaccggacgtgtttgtgcaggcactgaaagaggtagtaccacagctgaat
tggaaagaggtttgcttagaacttgatcatccggagttcatactgaaagatagaatcgga
cttgatctgctgctgaccattttccgtttgggtacacaatctgctctattcccacatcca
gaatgcatatatcgtcattggcaaaacgtaaacggacaactatcgctgatagcggttatg
ttaaaaaatcccgatctgttcacattttccgattacatcttcaccgccgcaccagtagag
atgctgaagacgccaccagacaccgataacaaagaagtgtgcgcttggaagtctctacac
ttagtggaagttttgctgtatattgccgatcaaggattctaccatcaagtgattgaattg
tttaaattccctgcacaacattgccccgatatattgtttttgtcactcttacacataaat
ccaccaattactgcattgcgtcaggagctatttagtcaactcataccgacttttctagca
aatcatccaaattcgggtgtaatacttttgaatgcttggaattcagcaaatttcggtgtt
attttacgccccattattatgcagtcaatgtccgattggtaccagcgcggcaccgaatat
gatcaggttaagctttcgcgcatacttgatgtagcacaggatttaaaagcattatcaact
ttgcttaacgaacgttcatttctatttgtaatcgatttggcatgcctagcatcgcgacgt
gaataccttaaactggagaaatggctaagtgataagatacgtgaacatggtgagcccttc
attcaagctattttgaaatgcctacaacgtcgttgtccacaaataacaaatgccaaaata
ccagaaagccaattgccatccaaacaggcacagctaccaccagaaacagtgacaacaatg
ttgcaatgccttcaaggttgcattggaaatgtaccaccagaaatagttgatcttattatg
cagatgacagcgaactgttcgatcatggcaaataaggcaagagctgctgtaccaccatta
gtgccacaactgcaaggtgtgatgcgtggacatcgcggcatggatatgggcggcgtaccg
ggcgtaccgccaccaccgttctccgccaatttgaatgcacaacaaatgtttggacccaca
atggatacgctatcgaatttaaccacaaatatagccaatttaaatcttggtggaccaaat
ggcgccttcaattttggaaacgtgttaggtaatttggcgtccacaccagcttctccgtcg
cgtcttatgaatccagctgccagtccatatccgctgaatgctatgcaaataccaccacca
aatgttggaaatttaggtagaatgccacaagcagcacaacagcccacaccaacgccaccc
aaccccatcaatccgggtatggccgatttgcaagggcccgtctccaaggaagttgaagat
gaggctaattcatattttcaacgtatctataatcatccaccacaccccacactatctatt
gatgaagtacttgatatattacaaaggttcaaggattcgaatatacgtcgtgaacaagaa
gtttatcaatgtatgttgcgtaatctattcgaagaatatcgctttttcccacactatcca
gagaaggagctccaaattacagcacaattatttggtggcattatagagcgtaatttagtg
ccctcatgtgtggcattaggtttggccttgcgctgtgttttggatgcattacgcaaacag
gactcgaagatgtataatttcggcataacggcattggatcgtttcaaaaatcggctgcat
tcatacaacaaatactgtgaatacatacgttctattgcacattttcatgaatttccaccg
catttgattcaatatgtagaatgtggctatctgcaacaggaaccaccaccagccaagata
caaatgctgatggctggcagcggacagcagccgcagcccgattcaatttatcgcagcaat
tccgtgacaggaaatttagtaacaacgccaacacaacaaaagcccatggttgttgctcag
tccatacatgcatcacgtatgaaatcaattgctaccgctactaatatcgatacactattg
gttgccaatcaggaggagaaggtcactataccgcccgaaccagtacaggataaaaccgca
ttcatattcaacaatttaagtcaactgaatataccgcagaaatgcgaagagattaaggag
atcatgacgaaggaatattggccgtggctagcacagtatctggtgctgaaacgcgcttca
ttggaattcaactttcattcgttatatttcaatttcttagaggcactgaagaatcccgag
atcaataaatatgtaaccaaggagacactgcgtaatataaaagttttactacgttccgat
aagggtgtggtgaatttctctgatcggagtttgttaaagaatctcggtcattggttgggc
atgatgacgttgggacgcaataaaccaattttacaaattgaactggacttgaaaacccta
ttggccgaggcatatcataaaggccaacaagaattgctctttgttgtgccatttgtggcc
aaaatattggaatcttcaggtaaatcgaaagtcttcaaaacacctaatccatggacaatg
gctattatgaatgtacttggagaattgcatcaggagcctgaattgaagcttaatttgaaa
tttgaaattgaagtgctttgcaagacattaaatttggatttgcagaaattaaagccgatt
gtttatttgaaggatccctcacgttcgatgaatatcgaacatcaaatggcccagcccaaa
cccaaaaatattgaggcaccccctcaacaacaacaacaacaacaaccaccgtcacaaggt
caaactccaggtcccggacaaatgggacccaacgattcagacgcacaagccttactaatg
ggcggaggtggtagtggtgtcgttggcggcgcaaacataccaggcggtgtagtgccttca
cccagcattagcaacgaatcaaccggacaggttataatgcaagcgcccgaaccgcgtttc
tctttcgtcgatataaatatagccaatttccatacgatcggtcagcatgtggtactatcg
ccgaatataacatttttacatgccaatcctggtatgaagcatattatactcaatgcaatt
gaacgcacaattaccgaatggctgcaaccggtcgtagatcgtagtgtacgcattgctgtg
accacaacagagcaaattgtgcgcaaagatttcggactagatccggatgagaatcgcatg
cgcacagctgcacatcaaatggtgcgttatttatcagccggcatggcgatgattacctgt
aaggactctttgtcgcaaacattgacaaataacatacgtaaagcgttcttatctgctctg
accggtggaccaagttatcaggacatcgaagcggcggcaatacagctgagcaatgataac
gtcgaactggcttgcgctttcatacaaaagacagcggctgagaaatcaacgcccgaagta
gatcgacgcatggccaccgactttgatacacgtaaaatgaccagagacgagggcggtcgc
ttttacgacacacaaacattggcttatcaaaccgagcgcatgccggagcaagtacgcttg
aaggtcggcggcataccacatacacaattcgctgtatacgcagagtttgcacgcaatata
cccggtttccaaccgatgaccgaacgcgatatcgctctattcttgcccaagccacaagag
ttgccaccggctactttcggcaccgacgaaatgggcctcctatatgccgaattagctgcc
aaaatggaagcattcctcaacagcaccatgaatatatccacattgcagttgcaggccagc
aaaatacatgcgttgctcaatgccctaatggtaaccaggcgtatacgtgataatgaatcg
gctctcaatctattgacacgcgtcgttgagggtcttattgaaggcttggtgaacataccc
gagcatatcgagcaaatgaaattataccgtgatatacatttacgtatactgaatatgttg
cagaatacttttggtgctggtgtgacggaacgtgcaatcaccaagtgcatcttcgatgta
cgtgaagaggtgcgctacaatgttgaagctatcaaatggcttataacctcacatttcatt
aatgtgccgcaattcgatttgttgttgcgcgaagctatggataatggcaataattacatg
gctgtcacattcgccatgacattaatggaacgtctgcttgatggacgcactagtgccact
ttggaaacagaaatgaccggcacattcgagatgttaggccgtttgccacagaatcgtcat
cgctatcctgaagcaacaactcaccagattgacatgatggatgcgggacctttcggcggt
gctgatcgctatttggccggtgccacacaatatatgcactcgggcatgcagcatgtacgg
tccaacgattgcgacgatccacccggtttgcaagagaagaccgaatttctgctcaaagac
tgggtctccatctacaaccaatcgaacaatttgtcgcgtgagaccaagatcttcacatca
ttcgtacagaagatgaatatgtatggcattttgaagaccgacgacttgataacgcgcttt
ttccgtcaagccacacaaatctgcattgatttggtgtatcgcatactgaacgacccaagc
aattcaccattgcaagcgcgcaccaaaatcttccactggatcgacgcatttgtgcattta
attgctctgctggtacgccactccggcgaagcgggcaatcccacgacgaaaatcaatctg
ctaaacaaggtgctcggcattgttctcggcatattgctgcaggaccaagaactgcatggc
accgcattccaacagctcggctatcatcgcttctttgtgatgctattcctagagctgagc
tcacccgacgctgtgctagagagtctgatgcacagcattatgactgccttctcgcacacg
tatcatctcctcaatccggcattggcacccggtttctgctacgcctggttggagttgatc
tcacatcgcatttttatcggacgtatactagcacagataccgcaacagaagggctggcca
ctgtactcacagctgctgctcgatttgttccgctatctggcaccattcttgcggaatgct
gagctagcgaagcccgtacaattattgtacaagggaacgctgcgtgttctgctcgtgcta
ttgcacgatttccctgaatttttatgtgactaccattttggcttttgtgatgcaataccg
ccgaattgcatacaaatgcgcaatataatattagctgcttttccacgaaacatgcgctta
cccgatccattcacgcccaatcttaaagttgatatgttggcggagactgcaacagcaccg
aaaatttgctcaaattacgtattcaatatacagccagcaaatttcaagaaagatctcgac
tcctatctgaaggcacgcgcaccggtgactttcctctcggagctgcgctcacacttgcag
atctcaaatgagcccggctcgcgttacaacattccgctcatgaatgcgctcgtgctgtat
gtgggcacgcaagctatttcgcacataagaagtaaaaatttcgtgcccaatacatcgaac
atcgcacatagcgcacacatggatatattccagaatttggctgtcgacttggatactgaa
ggacgctatctcttcctgaacgccattgccaatcaattgcgttatccgaatagccacacg
cactacttcagctgcgcagtgctacatctgttcgccgaggccaactcggaggccatacaa
gagcaaatcacacgtgtgctacttgaacgtctcattgtgaatcggccacatccatggggt
ttgttgatcaccttcatcgagctgatcaaaaatcccatctacaagttctgggatcatgac
tttgtgcactgtgcgccagagatttcaagattattcgagtcggtggcacgttcatgtatg
gttaagtcgaatcatcagccgcaaatcaacaacatggatggtgacattcaggaaatcaat
taa
DBGET
integrated database retrieval system
