Brassica oleracea (wild cabbage): 106294248
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Entry
106294248 CDS
T04124
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106294248
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106294248
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106294248
NCBI-ProteinID:
XP_013585270
UniProt:
A0A0D3C9S9
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Position
C5:5829039..5830439
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AA seq
370 aa
AA seq
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MASFFLIVSLLFALFFSPLVESQNPIDSCWRTNPNWESNRPALAGCAVGFGKYAAGGKDG
SIYVVTSSEDDPENPSPGTLRHAVIQTEPLWITFEHDMGIVLKNELIMNSNKTIDGRGAK
VEIANGPCITIQHVSHVIIHGISIHHCKPGKSGLVRSTPTHIGRRQGSDGDAISVFNSSN
VWIDHCYFSQSEDGLIDVVLGSTAVTISNSYFTQHDKVMLLGHNDNIVVDENMKVTIAFN
HFGPGLIERIPRVRRGFAHVANNRYNKWLKYALGGSADPTIFSEGNYFLAPDDPSKKQVT
KRLESGNDRSWKWISSKDVFLNGAYFEPSSNGKVTQVYEGEEEFSVYDGSLVPNLTSSAG
PLSCYSGRIC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcttcttaatagtttcacttctctttgcactattcttctctcctcttgtt
gagtcacaaaatccaatcgattcttgctggcgtacaaaccctaactgggaatcaaaccgt
cctgccctagccggttgcgcggtgggattcggaaaatacgcggctgggggcaaagacggg
tcgatctatgtggtcacaagctcagaagacgaccctgaaaaccctagccctggaacccta
cgacatgccgtgatccagaccgagccgctatggatcacattcgaacatgacatgggcata
gtgttgaaaaacgagctcatcatgaacagcaacaagaccattgacggaagaggagcaaaa
gtggaaatcgcgaacggaccatgcatcacgatccaacacgtgagccatgtcattatacat
ggtataagtatccaccactgcaaaccgggtaaatcgggtttggtacggagcactccgact
catattggtagacggcaaggatcggacggtgatgcaatctccgtgtttaattcgtcaaat
gtttggatcgatcattgttacttttcccagtctgaagatggattgatcgatgtggtactt
ggttctactgccgtcactatttctaatagttacttcactcagcatgataaagtgatgttg
cttgggcataacgacaacattgtggtagatgagaatatgaaagttacaattgcattcaac
cactttggaccgggtctcatcgagagaattcctagggttaggagagggtttgcccatgta
gcaaacaatagatacaataaatggctaaagtatgcgcttggaggaagtgccgatccaacc
atttttagtgaaggcaactactttcttgctcctgatgaccctagcaaaaaacaggtgaca
aagagactagagagtggaaatgatcgtagctggaaatggatttcttcaaaagacgttttc
ttgaacggagcttacttcgagccatctagcaacggaaaagtcacgcaggtgtacgaagga
gaagaggagttttcggtgtacgacggctctctcgtccctaatcttacttcttccgcaggt
cctctaagttgctactccggcaggatctgctga
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