Brassica oleracea (wild cabbage): 106294546
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Entry
106294546 CDS
T04124
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106294546
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
106294546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
nSTAND3
AAA_14
NPHP3_N
NACHT
AAA_5
Viral_helicase1
Cytidylate_kin
AAA_28
TIP49
AAA_30
TsaE
DUF815
AAA_2
ATPase_2
RuvB_N
ABC_tran
RNA_helicase
AAA_11
AAA_24
AAA_17
AAA_7
AAA_33
AAA_25
nSTAND1
IstB_IS21
KAP_NTPase
Rad17
bpMoxR
AAA_19
NB-ARC
SLFN-g3_helicase
PduV-EutP
Mg_chelatase
SRPRB
AAA_3
nSTAND6
PhoH
Sigma54_activat
Cytidylate_kin2
NTPase_1
AAA_13
ResIII
Motif
Other DBs
NCBI-GeneID:
106294546
NCBI-ProteinID:
XP_013585587
LinkDB
All DBs
Position
C1:complement(11877853..11881059)
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AA seq
486 aa
AA seq
DB search
MSTPMEIAEQNPILEPAIHPPHDASMEVSHQNCSQPTIIAEQLGVGEPLAATDPPPPPPA
PTPLHETKFLVSVEVCLKPSSTARLEDVQRAVERMLENRSMSYVDGLVLIPPHDLFLVEN
VQRICICDTEEWVKNNDVLLFWQVKPVVHAFQLTEEGPCEELGPDGQPSSFNEWILPAKE
FDGLWESLIYESGLKQRLLRYAASALLFTQKGVNPNLVSWNRIVLLHGPPGTGKTSLCKA
LAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEDNNLVFVLI
DEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVIILTTSNITTAIDVAFVD
RADIKAYVGPPTLHVRYEILRSCVEELISKGIISSFQGCDGLSIPSFSSLKEKVNANELH
DTDTNPWFCKQLVEAAKSCEGLSGRSLRKLPFLAHAALADPHSRDASNFLCAMIETAKRE
KSEQPE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcccatggagattgccgagcaaaaccctatactcgagcctgcgattcatcct
cctcacgacgcttccatggaggtctctcaccaaaattgcagtcaaccaacgattatcgcc
gagcaattaggcgtcggagagccactcgccgcaaccgatcctcctcctcctcctccagct
cctactcccctccacgagaccaagttcctcgtatctgtggaggtctgcttaaagccatca
agcaccgctcgtctcgaggacgtccagagagctgttgaacggatgctggaaaataggagc
atgagctatgtagatggccttgttctcatacctccacacgacttgttcctcgtcgaaaat
gtgcaacgtatatgtatttgtgatacagaggaatgggtgaagaataatgatgttctcttg
ttctggcaagttaagcctgttgtccatgcctttcagttaactgaggaaggaccgtgtgag
gaactgggccctgatggacaaccttctagctttaatgaatggattctacctgctaaggag
tttgatggcttatgggaaagcttgatctatgaatctggacttaagcaacggttactacgt
tatgccgcaagtgctttgctgttcacgcagaagggtgttaatccaaatctcgtttcttgg
aacaggattgttcttttgcacggaccaccagggactggcaaaacatctctttgcaaagca
ttggctcaaaagctttcaattcgatgcaactccagatatccacattgccaattgattgaa
gtcaatgctcactctctatttagtaaatggttctctgaaagtggcaagctggttgccaag
cttttccaaaagatccaagagatggtggaggaagataacaacctagtattcgtattgatc
gatgaagttgaaagtctcgctgctgcacggaaagctgcattgtctggttcagaaccttca
gattccatccgggttgtgaatgcactacttacacaaatggacaaactcaaatcagcaccg
aatgtgataatccttacaacatcaaatataactactgctattgatgttgctttcgtggat
cgagctgacataaaagcttatgttggccctccaactcttcatgttcgttacgaaatattg
aggtcttgtgttgaggaattaataagcaaagggatcatatcaagtttccagggctgtgat
ggactctctattccaagcttttcgagtttgaaagaaaaggtgaatgcaaatgagcttcat
gatacagatacaaatccctggttctgtaaacaattggtagaagctgcgaaatcgtgtgag
ggtttaagtgggagatcactgaggaaacttccgtttttagcacacgcagcacttgcagat
ccacacagtcgtgatgcaagtaatttcttgtgtgcaatgatagagacagcaaagagagag
aagtctgaacaacctgaatga
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