KEGG   Brassica oleracea (wild cabbage): 106301626
Entry
106301626         CDS       T04124                                 
Name
(RefSeq) probable pectate lyase 18
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106301626
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106301626
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106301626
NCBI-ProteinID: XP_013593527
UniProt: A0A0D3DFX6
LinkDB
Position
C7:complement(43477467..43479283)
AA seq 406 aa
MQTKKLFISIVSFLLYAPLIFSSPVPDPEAIVEEVHKSINASVAARRKLGYLSCTTGNPI
DDCWRCDPHWESHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVV
QDEPLWIIFQRDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCVTIQYVTNIIIHGVHIH
DCKRGGNAMVRSSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIMGSTAI
TLSNNYMTHHDKVMLLGHSDTYARDKNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFVAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNG
AFFTPSGGAQSSSYAKASSLGAKPSSLVGPLTVGSGALNCRKGSRC
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgcagacgaagaagctctttatctctatagtctcctttcttctctatgctccattgatc
ttctcttcaccagttccagacccagaagctatcgtcgaagaagttcacaagagcattaac
gcatcggtcgcagcacggaggaagctaggctacctctcctgcacaaccggcaacccaatc
gacgactgctggcgctgcgacccgcactgggagtcccaccgccaacgcctcgccgactgc
gccatcgggttcggcaaaaacgccatcggcggccgcgacggtcgcatctacgtcgtcacc
gactcaggcaacgacgacccggtgacccccaagcccggaactttacgccacgccgtggtc
caggacgagcctctctggatcatcttccagcgagacatgaccatccgcctcaaagaggag
ctcatcatgaactctttcaagaccatcgacggccgcggcgcctccgtgcacatcgccggc
ggaccttgcgtgacgatccagtacgtgacgaacatcatcatccacggggttcatatccac
gactgcaagcgaggcgggaacgctatggtgcggagctcgccgaggcactacgggtggaga
acggtgtctgacggcgacggtgtgtctatcttcggagggagtcatgtctgggttgatcac
tgctcgttgtctaactgtgaagatgggcttattgatgcgataatgggctcgacggcgatt
actttgtctaataattacatgacgcatcatgataaggtcatgttgcttgggcatagtgat
acttacgctcgtgacaagaacatgcagattactattgcttttaatcattttggtgaaggg
cttgttcaaagaatgccgaggtgtagacatgggtacttccatgtggtgaacaatgactat
acacattgggagatgtatgcgattggtggaagtgctaatcctactatcaatagtcaaggg
aacagatttgtggccccgaatattagattcagcaaagaagtgaccaagcatgaggatgcg
ccagagagcgagtggaagaggtggaactggagatcatctggtgatttgttgttaaacggt
gcgttttttactccgtccggtggtgctcagtcgtctagctatgctaaggcatcgagtctt
ggggcgaaaccgtcttctcttgttggaccgttgacggtgggttctggtgcactgaattgc
cgcaagggttctcgttgctga

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