KEGG   Brassica oleracea (wild cabbage): 106305942
Entry
106305942         CDS       T04124                                 
Name
(RefSeq) putative pectate lyase 11
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106305942
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106305942
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106305942
NCBI-ProteinID: XP_013597826
UniProt: A0A0D3DB97
LinkDB
Position
C7:33234640..33237460
AA seq 412 aa
MVSYSNNPFVYTFICLLSIGNTFVLSSSSLPHTQDPNLVVDEVNRSVFNASRRSLAYLSC
RTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRDGRIYVVTDAANDDPVNPRPGT
LRHAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCIKIHYETNIII
HGINIHDCKPGSGGMIRDGPRHTGWWVPSDGDAVAIFGGKHIWIDHCSLSNCDDGLIDAI
HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH
VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEG
DMLLNGAYFRQSGAGASSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRS
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggtttcgtattctaataatccttttgtttacactttcatatgtctcctatcaatcggc
aacacgtttgtattatcttcaagttcgttgccgcatactcaagatcctaatctagtagtt
gacgaggttaatagaagtgtattcaatgcgtcaaggaggagcctcgcctacctatcttgt
agaacgggtaatcctattgatgattgttggcgttgcgatccaaactgggagacaaatcgc
caacggctagccgattgtgctatagggtttggcaaaaacgctatcggaggccgcgatggc
agaatttacgtggtcacagatgcggccaacgatgatccggtaaaccctagaccaggaacc
ctaagacatgcggtcacgcaagaagaaccattatggatcattttcaagagagatatggtc
attaggctcaagaaagaacttatcatcacatctttcaagaccattgatggtagaggctca
agtgttcacataaccgatggaccttgcattaagatccactatgaaactaacatcatcata
catggtattaacatccatgactgcaaaccaggatcaggtggcatgattagagatggccca
cgtcacaccgggtggtgggtcccatcagatggagatgcagtggcgatatttggaggcaaa
cacatttggatcgaccattgctctttgtctaactgcgatgatggtctcatagacgccata
catggttcgaccgctataacaatatcgaacaactacatgacgcaccatgacaaggtcatg
cttttaggacacagcgatagctatacccaggacaagaacatgcaagtcaccattgcgttt
aaccatttcggagaaggactcgttcaaaggatgccacggtgcaggcatggatatttccat
gtagtgaacaatgattatacacactgggaaatgtatgctatcggtggaagtgcttctccg
acgatatacagtcaaggcaatagatttctcgctcctaatacccgatttaataaagaggtt
acaaaacatgaagatgcacccgaaagcgaatggagaggttggaactggagatcggaaggg
gatatgttgttgaacggagcatatttccggcagtcaggagccggagcttcatcgacatat
gcaagagcttctagcctaagtgctaggccatcatcgcttgtgggttccatcacaacgaca
gcaggaacactaagttgtcggcgaggccgtcgctcttga

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