Brassica oleracea (wild cabbage): 106305942
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Entry
106305942 CDS
T04124
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106305942
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106305942
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106305942
NCBI-ProteinID:
XP_013597826
UniProt:
A0A0D3DB97
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Position
C7:33234640..33237460
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AA seq
412 aa
AA seq
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MVSYSNNPFVYTFICLLSIGNTFVLSSSSLPHTQDPNLVVDEVNRSVFNASRRSLAYLSC
RTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRDGRIYVVTDAANDDPVNPRPGT
LRHAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCIKIHYETNIII
HGINIHDCKPGSGGMIRDGPRHTGWWVPSDGDAVAIFGGKHIWIDHCSLSNCDDGLIDAI
HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH
VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEG
DMLLNGAYFRQSGAGASSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgtattctaataatccttttgtttacactttcatatgtctcctatcaatcggc
aacacgtttgtattatcttcaagttcgttgccgcatactcaagatcctaatctagtagtt
gacgaggttaatagaagtgtattcaatgcgtcaaggaggagcctcgcctacctatcttgt
agaacgggtaatcctattgatgattgttggcgttgcgatccaaactgggagacaaatcgc
caacggctagccgattgtgctatagggtttggcaaaaacgctatcggaggccgcgatggc
agaatttacgtggtcacagatgcggccaacgatgatccggtaaaccctagaccaggaacc
ctaagacatgcggtcacgcaagaagaaccattatggatcattttcaagagagatatggtc
attaggctcaagaaagaacttatcatcacatctttcaagaccattgatggtagaggctca
agtgttcacataaccgatggaccttgcattaagatccactatgaaactaacatcatcata
catggtattaacatccatgactgcaaaccaggatcaggtggcatgattagagatggccca
cgtcacaccgggtggtgggtcccatcagatggagatgcagtggcgatatttggaggcaaa
cacatttggatcgaccattgctctttgtctaactgcgatgatggtctcatagacgccata
catggttcgaccgctataacaatatcgaacaactacatgacgcaccatgacaaggtcatg
cttttaggacacagcgatagctatacccaggacaagaacatgcaagtcaccattgcgttt
aaccatttcggagaaggactcgttcaaaggatgccacggtgcaggcatggatatttccat
gtagtgaacaatgattatacacactgggaaatgtatgctatcggtggaagtgcttctccg
acgatatacagtcaaggcaatagatttctcgctcctaatacccgatttaataaagaggtt
acaaaacatgaagatgcacccgaaagcgaatggagaggttggaactggagatcggaaggg
gatatgttgttgaacggagcatatttccggcagtcaggagccggagcttcatcgacatat
gcaagagcttctagcctaagtgctaggccatcatcgcttgtgggttccatcacaacgaca
gcaggaacactaagttgtcggcgaggccgtcgctcttga
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