Brassica oleracea (wild cabbage): 106312845
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Entry
106312845 CDS
T04124
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106312845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106312845
Transcription factors [BR:
boe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106312845
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
CDC45
Vfa1
PBP1_TM
Pox_Ag35
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
106312845
NCBI-ProteinID:
XP_013605973
UniProt:
A0A0D3EAK9
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Position
C9:complement(35452014..35457695)
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AA seq
353 aa
AA seq
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MQETILDFLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKNQN
YEASSAKKKRKRLETGKEEEDDDDGEGEEEEEEDNKQDGQQKMSHVNVERNRRKQMNEHL
TVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKERKTYAEVLSPRLVPSPR
PSPPVLSPRKPPISPRISHQHLLLHPISPRTPLPTSPYGGHPPQLPLIPQPPRSYSLGDP
PPYSPASSSSSPSVSSNHESSLINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVM
KIIAALEDLSLEILQVNINTVEETMLYSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagacaatactggattttcttgaagaatgtgaattcgtggacacttcactagcc
ggagatgatctgtttgctatcttagagagtcttgaaggcgccggagagatatctcccacg
gctgcatctacacctaaagatggaaccacaagttccaaagagttagtaaagaatcaaaac
tatgaagcttcatctgctaaaaagaagaggaaaagactagaaactgggaaagaagaagaa
gacgacgacgatggagaaggagaggaagaagaagaagaagataataagcaagatgggcaa
caaaagatgtctcatgtaaacgtggaacgtaataggagaaagcaaatgaacgagcatttg
accgttttacgttctcttatgccttgtttctacgtcaagcggggggaccaagcatcgatt
ataggtggagttgtggaatacattagcgagctacagcaagttcttcaatctttagaagcc
aagaaagaacgtaagacctacgcggaagtcctaagcccgagactagtcccaagccctcgt
ccttcaccgcctgttctaagcccgcgaaaaccgcctattagccctcgtatcagccaccaa
catctccttctccatcccataagccctcgaacccctctgcccacaagcccatacgggggc
catcctccgcaactaccactcatcccacaacctcctcgttcttacagcttaggggaccca
cctccatactccccagcttcatcttcttcttctccttcagtcagtagtaaccatgagagt
agtttgataaatgagcttgttgcaaactcaaagtcagctttggctgacgtggaagtgaag
ttctcaggagctaatgtgctgctcaaaacggtgtcgcataagatcccaggacaggttatg
aagataatcgctgctcttgaggatttgtctctcgagattcttcaggttaacattaacacc
gtcgaagaaaccatgctttactctttcaccatcaagattggaattgagtgccaactaagt
gcagaagaattggctcaacaaattcagcaaacattctgctaa
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