Brassica oleracea (wild cabbage): 106313329
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Entry
106313329 CDS
T04124
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106313329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106313329
Membrane trafficking [BR:
boe04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
106313329
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
106313329
NCBI-ProteinID:
XP_013606578
UniProt:
A0A0D3ECA6
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Position
C9:41179919..41181786
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AA seq
199 aa
AA seq
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MKITALLVLKAAPETSDPVILANASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQS
VQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVIDEYQKSFGEAWRSAKEDSAQP
WPYLAEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSM
ASQMFYKQAKKTNSCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgccttgcttgttctcaaggccgcccccgaaacctcggatccagtgatc
ctcgcaaacgcttcggacgtctctcactttggctatttccagcgatctagcgtcaaggag
ttcgtcgtcttcgtgggccgcaccgtcgctagccgaacccctccttctcagcgccagtcc
gtccagcacgaagagtacaaggttcacgcttacaataggaatggcctttgcgcggtggga
ttcatggacgatcattatcctgttcgaagtgccttttctcttctcaatcaggtcatagat
gagtaccagaagagttttggtgaggcgtggaggtctgctaaagaagactccgctcagccc
tggccttacttagccgaagctcttaccaaattccaggacccggcagaggctgataagctg
ttgaaaatccagagggagttggatgagaccaagattatcctccataagaccattgatagc
gttctagcccgcggtgagaagctggacagcctagtggagaagagctctgatttgagcatg
gcatcgcagatgttctacaagcaagcaaagaaaacgaattcatgctgcactattctgtga
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