Brassica oleracea (wild cabbage): 106315084
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Entry
106315084 CDS
T04124
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106315084
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
106315084
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
106315084
NCBI-ProteinID:
XP_013608310
UniProt:
A0A0D3AC74
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Position
C1:complement(34225963..34230026)
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AA seq
1104 aa
AA seq
DB search
MTTPARPLSVHDWDVLIEDFQDSGAPRDWFTSVFSIDSLPDLALSSLLKKEFPLPSKLSI
LVFLDEFSETLFDRRGDDTFDRLVDALRAIVQSPTDGSNGLKEQALISFTSVLVAVGSFS
VRHVEAVVDLLLALVNRPNHGFDRQARAVACECLRQLERAFPGLLSDVAGHLWSLCQAER
THAVQAYLLLFTTVVYNVVNQKLKVSLLSTSVPLVPFNAPPHLGQSQGLGPDQKELRRTL
AFMLESPYLFTSGAMMEFMGMVVPLASALELQASMLKVQFLGMIYSFDPMLCHVVLLMYT
QFPDAFEGQEKDIMRRLMLLSKETQIYLAFRLLALHWLMGLFNKVMLSGEVGKRKSVLEM
GRKFHPGVFDPLALKALKLDLLVQCYVGLSGGGDNGKSAGELLQECLVSVSDFKWLPPWS
SETGVAFRTLHKFLISASTHSDSDPSTTRSLMESSLFQNLQGLLVDMTSKFQILVPVVVS
FIDRLINCRKHQWLGERFLQTIDEKLLPKLEKSCLLTAYFPLLHRIAENDTIPPSRLIVL
LTKFVLTLVDKRGYDVGLKLWDQGTEVLGICRTLLSHHKSSRLFLGLSRLLSLMCLYFPD
LDVRDNARIYLRMLVCIPGRRLKNILKPADTVSPSTHSSAFFTVQSPRFRHDPNKSWNLS
SYIHLERVTSLLVKQSWFLSLPSLDVGNDGYSVIESKVQVDEDETDSSSQELLQLLPDSR
RIESGKSPTLRVMDAKIAEILERLRRYFSVVPDLRHMPGIKVRINCTLRLDAEPYSSILG
SQTQSPELDKVDSSPPALFATVVKFSSSAPYGSIPSCRIPFLLGEPHLVKNVQGSLDIVL
LGDAPKEEEKDGLGGGASVTVELEPREPTPGLVEVSMEANAESGQMIQGKLESVPVGIED
MFLKALAPPDEPEDTIPSYYSDLFSALWEVCGSSSSTAHETFALKGGKTAAAISGTRSVK
LLEVPAETVIQTSELHLAPFVVAITGEQLVNIVREGGIIENVVWQDEEEGGGQGTASSSS
MGATGSNRDPLRLTYIGYGDDQEVPMSRSRGKLGKIKMLMFLPPRYHLLFEMEVGEGSTL
VHIRTDYWPCLAYVDDYLEALFLL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacgactccggcaagacctctctccgtccacgactgggacgtcctcatcgaagatttc
caagactccggcgctcctcgcgactggttcacctccgtcttctccatcgactctctaccc
gacctcgctctctcctccctcctcaaaaaggagttccctttgccatcgaagctctcaatc
ctcgtcttcctcgacgaattctccgagactctcttcgacagacgcggcgacgacaccttc
gatcgcctcgtcgacgctctccgcgcgatcgtgcagtctcccacggacggatcgaacggg
ttaaaggagcaggctttgatctccttcacgtcggtgcttgtggcggttggttctttctcc
gtgcgccacgtggaagccgtcgttgacttgctgctcgcgcttgtgaatcgccctaaccac
gggtttgatagacaggcacgtgccgtcgcgtgcgagtgcttacgtcagctcgagagagcg
tttccggggttgttgtctgatgtcgctgggcatctttggtcgctgtgccaagcggagaga
acacacgccgtgcaagcttaccttctcttgttcaccaccgttgtttacaatgtcgttaat
cagaagctgaaggtttcgcttcttagtacttctgtgcctttggttcctttcaatgctcct
ccgcatctgggtcagagtcaggggttggggccagatcagaaggagctgagacggacgctg
gcgtttatgttggagtctccgtatctgttcacgtctggtgctatgatggagtttatgggg
atggtggtcccccttgcgtctgcattggagttacaagcttctatgctgaaagttcagttc
ctggggatgatttattcgtttgatccgatgctgtgtcatgttgtcttgcttatgtatact
cagttccctgatgcgttcgagggacaagagaaagatatcatgagacgtctcatgcttctc
tccaaggagactcagatctatcttgctttccgcttgcttgcgcttcactggttgatgggt
ttgtttaataaggtgatgttgagtggggaggttgggaagaggaagtctgtcctcgagatg
ggtcgaaagtttcatcctggggtatttgatccgctcgctttaaaggcgttgaagcttgat
cttctggtacagtgctatgtcggtttgagtggaggtggtgataacggaaaatctgcaggg
gagttgttgcaggaatgtttggtctctgtttcggatttcaaatggttgcctccttggagc
tcagaaactggtgtagcgttccgtactttgcacaagtttctgataagtgcttctacgcat
tctgactctgacccttccaccactagaagccttatggagtctagcctcttccaaaacttg
caggggttgctggtggacatgacttcaaagtttcaaatcttggtccctgttgttgtgtct
tttattgaccggttgataaactgtcgaaagcatcagtggttaggagagcggtttcttcag
acaatagatgagaagctgcttcccaaacttgagaaaagctgtttattaacagcttacttc
ccgcttctccatcggattgcggagaacgatacaatacctccttctagattgatagtgctg
ctcaccaagtttgtccttacacttgttgataagcgcgggtatgatgtggggttgaaactg
tgggatcaagggactgaagttcttgggatttgtagaacgctgttgagtcaccataagagc
tctagattgtttcttggactctctcgccttctttctctcatgtgtctctatttccctgat
ctagatgtccgagacaatgccaggatatatctgaggatgctggtctgtataccaggaagg
aggttaaagaacatattgaagcctgcagataccgtctctccatcaacacactcatctgcg
tttttcactgttcagagtcctcgtttccgtcatgatcccaacaaatcttggaacctttca
tcatatattcatcttgaacgtgtcacttccctactagtgaaacagtcatggttcttgtct
ctaccatcactagacgttggaaacgatgggtatagcgttatagaaagcaaagttcaggtt
gatgaagatgagacggatagtagcagtcaagagctcctccagcttttgccggattctcga
aggattgaatcaggaaagtcgcccacgttaagggtgatggatgcaaagatagctgagatt
ctcgaaaggttgaggagatacttctcggtggttcctgatctcagacacatgcctggaatc
aaggtgaggataaactgtactttgagattggatgctgaaccgtatagcagcatattgggt
agtcaaactcagagtcctgagttggataaagtggactcatcacctcctgcgttattcgca
accgtggttaaattctcatcttcagcaccttatggctctattccatcttgccgcatacct
ttccttttaggtgaacctcatttggtcaagaatgtacaaggctctttggacatagtcttg
ttaggagacgcgccgaaagaggaagagaaagatggcttgggaggaggagcatctgtaaca
gttgagcttgaacctagagagccaacacctggtttggtggaggtttcaatggaagcaaat
gcagagagtggtcagatgattcaggggaaactcgagagcgtccctgtggggatcgaagac
atgttcctgaaagctcttgctccacctgatgaacctgaagatacaataccgagctactac
tcagatctattcagtgctttgtgggaagtgtgcggttcatcgtcaagcaccgcacacgaa
acatttgcactaaaaggaggcaaaaccgccgcagcaatcagcgggactcggtcggtgaag
cttcttgaagtccctgcagaaactgttatacaaaccagcgagcttcacttagcccccttt
gtggtggctatcaccggagaacagcttgtgaacattgtaagagaaggaggaatcatcgag
aacgttgtgtggcaggacgaggaagaaggaggaggtcagggtactgcttcttcttcctcg
atgggggcaacaggatctaaccgagaccctctacgtcttacatacataggatatggagac
gatcaagaggttccgatgagtaggagtagagggaagttgggaaagataaagatgctgatg
tttttgccgccgagatatcatctgctgtttgaaatggaagttggtgaagggtcgacattg
gtgcatataagaacagattattggccttgcttagcttatgttgatgattacttggaagct
ttgttcttgctttag
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integrated database retrieval system