Brassica oleracea (wild cabbage): 106319450
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Entry
106319450 CDS
T04124
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106319450
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106319450
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106319450
NCBI-ProteinID:
XP_013613230
UniProt:
A0A0D3E205
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Position
C9:complement(5104666..5107707)
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AA seq
428 aa
AA seq
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MFHPKTLKLYLQQEAKNTMLVSSHASFTLVFLYCIFFSAVALSLPVSDPELVVEEVHRKI
NESISRRNLGYFSCETGNPIDDCWRCDKDWEKNRKQLADCGIGFGKNAIGGRDGEIYVVT
DPGNDDPVNPKPGTLRYAVIQDQPLWIIFNRDMTIQLKEELIMNSFKTLDGRGASVHISG
GPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGWRTISDGDGVSIFGGSHVWVDH
CSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYVQDKNMQVTIAFNHFGEG
LVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNGPFDKEVTKHEDA
PESEWSHWNWRSEGDLMLNGAFFTLSGAGPGKSSSYSKASSLAARPSSHVGEITIASGAL
SCKKGSHC
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatcctaaaaccttaaaactttatctacagcaagaagccaagaacacaatgcta
gtttcatcacatgcatcctttacacttgtctttctctactgcattttcttctccgcagtg
gctttgtctttgcccgtttctgaccccgagctcgtcgttgaggaagtacacaggaaaata
aacgagtctatatcaagaaggaacttaggatacttctcgtgtgagaccggtaatccaatc
gatgattgttggcgatgcgacaaagattgggagaaaaaccggaaacagttagctgattgt
ggaatcggttttggcaaaaacgcaatcggtggtcgtgatggcgaaatctacgtggtcacc
gatccaggaaacgatgatccggtaaaccctaaacccggaacactaagatacgcagtaatc
caagaccaaccgctttggatcatatttaaccgtgacatgacgatccaactaaaagaagaa
ctcataatgaactctttcaaaaccctagacggtcgaggagcatccgtacacatctctggt
ggaccgtgtataaccatacaatatgtgaccaacattataatccacggtttgcatatacat
gattgtaaacaaggtgggaacacttacgtacgagactctccagagcattacgggtggcga
acgatatcggacggtgacggtgtgtcgatcttcggtgggagtcacgtgtgggttgatcat
tgctcgctctcgaattgtaacgatgggttgattgatgcgatacgtggatcaacggctata
acgatctctaataactacttgacgcatcacaacaaggttatgttattaggacatagcgac
acgtatgtgcaagacaagaacatgcaagtcactatcgcttttaaccattttggagaaggc
ctcgtccaaagaatgccaaggtgtcgacatggatatttccatgtggtgaacaatgactat
acacattgggaaatgtatgcaattggaggaagtgctaatcctaccatcaactctcaaggc
aaccgttttcttgctcctaatggcccttttgacaaagaggtaaccaagcatgaggatgcg
ccagaaagcgagtggagtcactggaactggagatcagaaggagatctaatgcttaacggt
gcattctttacactttctggagctggaccaggtaaatcgtcaagctattcgaaagcctca
agcctagctgctagaccgtcctctcacgttggtgagataactatagcatcgggtgcactc
agctgcaaaaaaggttctcactgctga
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