Brassica oleracea (wild cabbage): 106327782
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Entry
106327782 CDS
T04124
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106327782
Transcription machinery [BR:
boe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106327782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Lac_bphage_repr
Motif
Other DBs
NCBI-GeneID:
106327782
NCBI-ProteinID:
XP_013621483
UniProt:
A0A0D3AS29
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Position
C2:complement(27663827..27666752)
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AA seq
484 aa
AA seq
DB search
MMATTAVVGLNAGKRLLSSSFYYSDVTEKFLSVNDLCSSQYYYHIASTRSGITAKKTSSS
SSSNYSPSFHSSSRHTQSAKALKESVDVVQQWLPPGSDQELEEDDDTVEALLLLQRSLLE
KQWNLSFEKKKKIPVTCSGISARQRRMGAKKKTNIKVVNSDLFQNNRVKGGYVKGVISDD
VLSHAEVVRLSKKIKSGLRLDEHKSRLKDRLGCEPSDEQLATSLKISRAELQAWLMECNL
AREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWW
IRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVR
NATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNRLENNPWHGYDEWALKDEVRKLISA
TLGDREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKSKMEAM
ILKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacaacagctgttgtaggactcaacgcagggaaaagactgttgagttcttcc
ttttactactcggacgtcaccgagaaatttctatctgtaaatgatctttgttcatcacag
tactactaccatattgcttcaacaagaagtggaataactgcgaaaaagacatcatcatca
tcatcatccaactacagtccgagctttcactcatcaagtcgccacacacaatctgccaag
gctcttaaggagagcgtggatgttgtgcagcaatggctacctcctggatctgatcaggaa
ttggaagaggatgatgataccgttgaggcactcttgttgctgcagaggtctttgttagaa
aaacagtggaatctttcctttgagaagaagaagaagattccggtgacgtgttcagggatt
tcagctcggcaaaggagaatgggtgctaagaagaaaactaatattaaagtggttaattca
gacttgttccaaaacaaccgtgtcaagggtggttatgtgaagggtgtcataagtgacgat
gttcttagtcacgctgaagtcgtgcgcttgtccaagaaaatcaaatctggcctacgtctt
gatgagcataagtcaagattgaaggatagattagggtgtgagccttctgatgaacagctt
gcaacatccttgaagatatctcgtgccgagctgcaggcatggttgatggaatgtaatcta
gctagggagaagttagctatgagcaacgttcgtttggttatgtctattgctcagcgttac
gataatatgggagcagaaatgtctgaccttgttcagggtggtcttatcggacttttgcgg
ggaatagagaaatttgattcttccaaaggtttcagaatctcaacttatgtatactggtgg
attcgacagggtgtctcaagagcattagtggacaactcacgaacattgaggttgcctact
cacctgcatgaaaggctaggtttaatccgaaacgcaaagcttagacttcaagagaaaggg
atcacaccctccattgatcggattgcagagtcactaaatatgtctcagaagaaagttaga
aatgcaacagaggctgtaagcaaaatattttccctagacagagatgcattcccttctttg
aacggtctccctggagaaacccaccacagctacattgcggataatcgtttggagaacaat
ccgtggcacgggtacgatgagtgggcactcaaggatgaagtgaggaagcttataagtgca
acacttggagatcgggaaagagaaattattaggttatactatggtctagacaaagaatgt
ctcacatgggaagacattagcaaacggataggattatctcgagagagggttagacaggtg
gggcttgtggcgctcgagaaactaaaacacgcagcgaggaagagtaaaatggaggcaatg
atcctcaagaattga
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