KEGG   Brassica oleracea (wild cabbage): 106329526
Entry
106329526         CDS       T04124                                 
Name
(RefSeq) probable pectate lyase 8
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106329526
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106329526
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106329526
NCBI-ProteinID: XP_013623664
UniProt: A0A0D3AZN9
LinkDB
Position
C3:complement(830408..835840)
AA seq 519 aa
MVAHKGVHNHQKPTCICIIWFCLLVSLPHHGRASFPLSSSSSFNLSLPHQHPFPEHVVLN
VQRKLNDSLSRRNLLTYQQDDATTASSAPIPSCLTGNPIDDCWRCDPNWSQNRQRLADCS
IGFGQGTLGGKGGRFYLVTDSSDDDAANPLPGTLRHAVIQPEPLWIIFSGDMGITLRHEL
IVGSFKTIDGRGTNVQITGHGCLTIQQVSHVIVHNVHIHHCKPSGNTLVASSPTHVGFRG
VSDGDGISVSASHHIWVDHCSLGYCSDGLIDVILASTAVTVSNNYFHHHDEVMLLGHDDR
YTADSGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSANPTINSQGN
RYTAPIDPNAKEVTKRVDSNEKHWGKWNWRTEGDVMVNGAFFVPSGDGVSPAFARATSLQ
AKTADVIDQLTVNAGVFGDPSGRNGQGGAFPGITGGGGTVTRGYSKGGPGGGSSDSDDGI
FTMIFGSNSSAAAVALRPRQVWSIVFTIILLWYFPHHRR
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggtggctcataagggggtccataatcatcagaaaccaacctgcatttgcataatctgg
ttctgcctcttggtctctctccctcaccatggaagagcatccttcccattatcatcatca
tcttccttcaatctttctctcccacaccaacacccatttcctgaacatgttgttctcaat
gttcaaagaaaactcaacgactctctctcccgaagaaacctcctcacttaccaacaagac
gacgccaccacggcctcgtcggcgccaataccttcttgcctcaccggcaacccaatcgac
gattgctggcgctgcgacccaaactggtcgcaaaaccgccagcgcctcgccgactgctca
atcggcttcggacaaggcacactcggcggcaaaggcggccgcttttacctcgtcaccgac
tcctccgacgacgacgcggcgaacccacttcccggaaccctccgccacgccgttatacag
ccggagcctctctggatcatcttctccggcgacatggggatcacgctccggcacgagctc
atcgtcgggagcttcaagacgatcgacgggagaggcacgaacgtccagatcacgggccac
gggtgcctgacgatccagcaggtgagccacgtcatcgtccacaacgtccacattcaccac
tgcaaaccctccgggaacactctcgtcgcttcttcgccgacgcacgtcggattcagagga
gtctccgacggagacgggatctcggtctctgcttcgcaccacatttgggtcgatcactgc
tctctcggttactgttccgacggactcatcgacgtcatcttagcatcaaccgccgtcaca
gtctccaacaactactttcatcaccacgacgaggttatgctcttaggtcacgacgacagg
tatacggcggactcggggatgcaagttacgattgcgttcaaccattttggggaggggctg
gtgcagaggatgccacggtgtagacatggttatattcacgtggtgaacaacgattttact
gcatgggagatgtatgcaataggtggaagtgctaaccctacgatcaatagtcagggtaac
cgttacaccgcacctattgatcccaatgctaaagaggtgacgaagcgtgtggactcaaac
gagaaacactgggggaaatggaactggaggacggagggagatgttatggttaacggagcg
tttttcgtgccgtcaggtgacggagtgagtccggcgttcgcccgagccactagtcttcag
gcaaagaccgctgatgtaattgaccagctcacggtcaatgccggcgttttcggcgatccc
agtgggagaaacgggcaaggaggagctttccccggaatcacgggcggtggtgggaccgtc
acacgcggttacagtaaaggtggacccggaggcggtagcagcgacagcgatgatggcatt
ttcacaatgatattcggtagcaattccagtgcggcggcggtggctttgaggccgagacaa
gtctggtcaattgtattcactatcatcttactttggtattttccacaccataggagatga

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