Brassica oleracea (wild cabbage): 106334608 Help Entry 106334608         CDS       T04124                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism boe  Brassica oleracea (wild cabbage) Pathway boe03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     106334608  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:boe03019]     106334608 Enzymes [BR:boe01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      106334608 Messenger RNA biogenesis [BR:boe03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      106334608 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA ATP_bind_1 AAA_22 ABC_tran FtsK_SpoIIIE AAA_24 AAA_29 GTP_EFTU RecA_N MMR_HSR1 SRPRB Motif Other DBs NCBI-GeneID:  106334608 NCBI-ProteinID:  XP_013628378 UniProt:  A0A0D3B9N9 LinkDB All DBs Position C3:complement(22488797..22491477) Genome browser AA seq 445 aa AA seqDB search MSYGGPSMNPPAMIGAVPGGSSNLKQVKLDRESELRIEVSDEPLRLRVVNGTAEIFGAEL PPEIWRTFPPRLKFAVFTWYGATIEMDGVTETDYTADETPMVSYVNVHAILDARRRFAKA STSTDSDSPQGPRVIVVGPTDSGKSTLTKMLISWAAKQGWKPTFVDLDVGQGSITIPGSI AATPIEMPLDPVEGFPLDMALVYYYGHTTPANNVELYKTMVKELAQVLERQFLGNPESRA AGMVINTMGWIDGIGYELLLHAIETFNASVVLVLGQEKLFSMLKDVLKSKSNVDVVKLHK SGGVVARNRDYRKVARSSRIQEYFYGLSKELSPYANTSSFSDVQVFRIGGGPQAPRSALP IGSDPVSNPLRVTPVNIEERDLLHSILAVSYAEEPDQIVSSNVSGFVYVTEVDVLRKKIT YLAPSPGALPSKILVAGSLTWLESH NT seq 1338 nt NT seq  +upstreamnt  +downstreamnt atgtcttacggtggtccgtcgatgaacccaccggctatgattggcgcggttcctggaggt tctagtaatctgaagcaggtgaagctggacagagaaagcgagctaagaatcgaagtctct gacgagcctcttagactccgtgtggttaacgggactgctgagatcttcggcgctgagctg cctcctgagatctggcgtacctttcctcctcgcctcaaatttgcggttttcacttggtat ggagccacaattgagatggatggtgtcactgaaacagactatacagcagatgagacacca atggtcagctacgttaatgtgcacgccatacttgatgcaaggagacgttttgccaaagct tccacatctaccgactctgattctcctcagggacctagagtcattgtagtagggcctacg gattcaggaaagagcacattgactaagatgcttattagttgggcagccaaacaaggatgg aagcctacatttgtagaccttgatgttggccaaggctccattacaatacctggttctatt gctgctacacctatagagatgccgcttgatcctgttgaagggtttcctctagatatggct ctcgtctactactacggtcacaccacaccagctaacaacgttgaactatacaaaactatg gtgaaggagcttgcacaagtgctggagagacagtttcttggaaaccctgagtctcgagct gctggtatggtgatcaacacaatgggatggatcgatggtatcggttatgagctgcttctc cacgcaattgaaacattcaacgcctcggttgtacttgtcttgggtcaagaaaagctcttc agcatgcttaaagacgtgctgaagagtaagagcaatgtggacgttgtgaagcttcacaag tcaggtggagttgtggctaggaaccgtgactaccgtaaagtagcgagaagctctaggatt caggagtatttctacggtctatcgaaagaactctctccttatgccaacacatctagcttc agtgatgtgcaagtgttccgcattggtggtggaccgcaagctccaaggtcagctcttcca atagggtctgatcctgtttctaatccgttgagggtgacgcctgtaaatattgaagagagg gatctgctgcattctatcctcgctgtctcatatgcagaagaaccggaccagattgtctct agcaatgtttcagggtttgtgtatgtgactgaggttgatgtgctgaggaagaagataacg tatttagcaccatcgccaggggcattgcctagcaagatcttggtcgctggatctttgaca tggcttgagagtcattag

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