Brassica oleracea (wild cabbage): 106336636
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Entry
106336636 CDS
T04124
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106336636
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106336636
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106336636
NCBI-ProteinID:
XP_013630980
UniProt:
A0A0D3BXU2
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Position
C4:complement(30065105..30066694)
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AA seq
331 aa
AA seq
DB search
MTTLPYADVDCNLRALAGRAEGFGRLAVGGLHGDLYVVTSLADDGPGSLREGGRRREPLW
IVFAVSGTIHLNSYLSVSSHKTIDGRGQRIKITGKGIRLKECEHIIICNLEFEGGRGHDV
DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFGQHDKTMLIGADPSHVD
DRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA
GVKKKTFEYYPEKAADREEVRAGLVRSENDLFLNGAQASLLTGAGGECVFHPSEHYPTWT
VEPPSDTLKQIIKICTGWQSLSSPSDHGVPK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctaccatacgccgacgtcgattgcaacctcagagctttagccggccgtgcg
gagggcttcggccgactcgccgtcggtggtctccacggcgatctctacgtcgttacatct
ctcgcagatgatggacctggatctctccgcgaaggaggaaggaggagagagccgttatgg
atcgtgttcgcggtctccggaactatacatctcaattcatacttgagcgtatcgtctcac
aagacgatcgatggaagaggacaacggatcaagatcactgggaaagggataaggctgaag
gaatgtgaacatatcatcatttgcaatttggagtttgaaggtggtagaggccatgacgtc
gatgggattcagattaagccaaagtctagacacatttggattgataggtgtagcttgaga
gactacgatgatgggcttattgatatcactaggcagagcactgatatcactgtttctaga
tgttactttgggcagcatgataagacgatgttgattggagcggatccttctcatgttgat
gataggtgtatcagagtgacgattcaccattgtttctttgatggaactaggcagaggcat
cctcgtctcaggtttgggaaagttcatttgtataacaattatacaagaaactgggggata
tatgctgtctgtgctagcgtagaagcgcaggtgttctctcaatgcaatatatacgaagca
ggagtgaagaagaaaacttttgaatactacccagagaaggctgctgacagggaagaagta
agagctgggttggttcgatcggagaatgacttgttcttgaacggagctcaagcttccttg
ttgacaggggccgggggagaatgtgtgttccatccaagcgagcattacccgacatggacc
gtggagcctccatcggatactctcaagcaaatcatcaaaatctgtactggttggcaatca
ttatcctctccttcagatcatggcgttcctaagtag
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