Brassica oleracea (wild cabbage): 106338955
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Entry
106338955 CDS
T04124
Name
(RefSeq) chaperone protein ClpB4, mitochondrial-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106338955
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP100
106338955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Sigma54_activat
AAA_22
AAA_16
AAA_14
nSTAND3
RuvB_N
Mg_chelatase
AAA_7
IstB_IS21
TniB
AAA_3
bpMoxR
Zeta_toxin
AAA_28
AAA_18
AAA_24
NACHT
NBD_SMAX1
ABC_tran
NET2A_C
PduV-EutP
T2SSE
DUF5798
Motif
Other DBs
NCBI-GeneID:
106338955
NCBI-ProteinID:
XP_013633263
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All DBs
Position
C4:42863969..42867360
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AA seq
830 aa
AA seq
DB search
MAYRRLSKSISLAIKAHNALSRRPSLLFRSRALSASAHHFSSSSFLLRPSSFIGAPNNGI
ITPATLAAPRSGQLLPLSLQLQLPSPRRFMSTDGDKDAHEKYENALEKCGTDLTEMARQG
KLPPLIGRDDEIKRCIQILGRMTKSNPLIIGEPGVGKTAIAEGLAQRIVRGEVPEHLLNR
KVISLDMGSLAAGTTYQGEFEAKLKALLKEITASNGKTLLFIDEIHTLVGAGACTGSMDA
SKILKPMLARGELRCIGATTLTEYRKYIEKDPTLERRFQQVFCGQPSVEDTVSILRGLRQ
RYEKHHGVKISDCSLVSAAVLSDRYITERFLPDKAIDLVDEAAAKLKMETISKPTELEEI
DKTVIKLKMEKLSLRKDSFKSSEAFFKKEKEMENDLTKLKDKQKEITKKWEELTTQWDED
KSLITKLRSLKEEIDVSAKRENSLNRTAELKYGTLMSLQGQIEEAEKNLTKSGSSELSQI
KEGVTDRHIAEIISKWTGIPLSNLQQSEKEKLLLLEDVLHKKVIGQGKAVESIADAIRCS
KAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNTDNAIVRIDMSEYMEKSNVSRLI
GASPGFVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNILLQLLDDGRVTDSQGRTV
SFRNCFVIMTSNIGAQSILDTFRGNEDRKEAVYETMKQQVVELARKTFKPEFMNRIDEYI
VFQPLDTKEISKIVEIQMRRVKNRLEENKIKLEYTQEAVDHLAQLGFDPNNGARPVKRVI
EKIVKKEIANKVLKGEFAADDTILLDVDQTSNELVIKKLESDAPVEEMAA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaagattgtcaaagtctatttccctagccatcaaggctcacaatgctttg
tcgagaagaccctctctcctcttccgttctcgcgctctctctgcctctgctcaccacttc
agctcaagttcctttcttctccggccaagttccttcatcggagctcccaataacggcata
attactccagccactctagccgctcctcgtagtggccaactgttacctctttctctccag
ctccagctcccttctccgcgccgcttcatgtctacggatggagataaagatgcacatgaa
aagtatgaaaatgcacttgaaaagtgtggaactgatttaactgagatggctagacaagga
aagctccctcctctaattggacgtgatgatgaaattaaacgctgcatccagatactaggc
aggatgacaaaaagcaatcctcttatcataggtgaacctggtgtaggaaagactgctatt
gcagaagggttggcccagcgaattgtaagaggagaagtccctgaacatctcttgaatcgg
aaggtgatatctcttgacatgggttcgttggctgctggcaccacatatcaaggcgaattt
gaggcgaaactgaaagcattactcaaggaaataactgcttccaatgggaagacactcttg
ttcattgatgaaatccacactctcgttggtgcaggtgcttgtacaggttcaatggatgcg
agcaaaatcttgaaaccaatgcttgcaagaggtgaactgcgatgcattggagcaacaacg
ctgaccgaataccgcaaatacatagagaaagatccaactctggaacgtaggtttcagcag
gtgttctgtggccaaccatctgttgaagacaccgtctctatacttcgtgggttaagacag
cggtacgagaagcaccatggtgttaagatatcagattgttcccttgtttcagcagcggtt
ttgtcagaccgctacatcactgaacgcttccttccagacaaagctattgatctggtagac
gaagctgctgcaaagctgaagatggagaccatttcgaaaccaactgaactcgaagaaata
gacaaaactgtgatcaaactgaagatggagaagctttctttgagaaaagattcgtttaaa
tcatctgaagctttctttaaaaaggaaaaggagatggagaatgatttgaccaagcttaag
gataaacagaaagaaatcaccaagaaatgggaggaactcaccacgcaatgggacgaagac
aagtctctcattactaaactacgttcacttaaagaagagattgatgtatccgctaaacgt
gaaaatagtctaaaccgtactgctgagctgaagtatggaacacttatgtccctccaaggc
cagatagaagaagctgagaagaatctcaccaagtctggatcctctgaactgtcacaaatc
aaagaaggcgtaaccgatcgccacatagcagagataataagcaagtggacaggtattcca
ctatcaaatcttcagcaatcagagaaagaaaagctgcttctcttagaagacgtgcttcac
aagaaagttatcggtcaaggaaaggctgtagaatcaatagcagatgctatccgctgttca
aaggccggtctctcagaccctaaccgcccaatagcaagttttatgttcatgggtccaaca
ggggttggtaaaaccgagcttgccaaggccctagccggataccttttcaacactgacaac
gcgattgtgaggatcgatatgagtgagtacatggaaaaatccaacgtctcgcggctcatt
ggtgcatctcctggctttgtcggttatgaagaaggtgggcagctaaccgaagctgtgcgc
aggagaccttactcggtggttctgtttgatgagatcgagaaagcccaccctgacgtcttc
aatatcttgcttcagctactagacgatggaagagtaactgattctcaagggaggacggtg
agtttcagaaactgctttgtgataatgacgtctaacataggagctcaaagtatactcgat
actttccggggcaatgaagaccgcaaagaggctgtttatgagacgatgaagcaacaagtt
gtggagttagcaagaaaaactttcaagccagagtttatgaacagaatcgacgaatacatt
gtcttccagcctttggatacaaaagaaatatccaaaatcgtggagattcagatgagacga
gtcaagaataggttggaagagaataaaataaaacttgagtacacacaagaagcagtggac
caccttgctcagctagggtttgaccccaacaatggggcaagaccggtgaagcgagtgatt
gagaagattgtgaagaaggagatcgccaacaaagttctgaaaggagaatttgctgcggat
gacactattcttctcgatgttgaccagacaagcaatgaactggtcatcaagaagctcgag
agtgatgctcctgttgaagaaatggctgcttga
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