Bos mutus (wild yak): 102267797
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Entry
102267797 CDS
T02919
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X6
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bom
Bos mutus (wild yak)
Pathway
bom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102267797 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102267797 (CNOT1)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102267797 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102267797 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
102267797
NCBI-ProteinID:
XP_005899973
UniProt:
L8IE34
LinkDB
All DBs
Position
18:36252484..36335356
Genome browser
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSTDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNSDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagtagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtca
ctgattacgaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagcacagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaggaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctgtcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacagaatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttggctgattttatgcaa
gaagtgggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttaggaatgatggctcgaact
cattcaggattaacagacggaattccattacagagtatctctgctcctggcagtggaatc
tggagtgatgggaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtc
ttgatcgatgttctcaaagaactgaacccaagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctgggtttcaaattcgtgatagtaaaggacttcataatgtagtctatggc
attcaaaggggtctgggtatggaagtgttccctgtagatctcatatacagaccttggaaa
cacgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgccgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctaaggctc
gcagaggtagggcaatatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttattacaaatcaacacctcctggcacaccttgcgccac
gaactcatctccactctgatgccaattttccttggaaaccaccctaactcagctataatt
ttgcactatgcatggcatggacagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaagttgtctcgaata
cttgatgtggcccaggacttgaaggctttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaaatgg
ctcacagataaaattcgagagcacggagagccttttatccaggcttgtatgactttttta
aagagacggtgtccttctattttggggggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaaccctcgcgacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaaccatcctcaccatggtggccaattgcagtaacgtt
atgaacaaggccaggcagccaccaccgggagttatgccaaaaggacgccctcctagtgct
agcagcttggacgccatttctcccgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggctttcctccaaatttg
ggttctgcattcagtaccccacagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
agcgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagagatttaaagattctacc
ataaagagggaacgagaagtatttaactgtatgctaaggaacttgttcgaagaatatcgg
ttcttcccccaataccctgataaagagttacatataacagcctgcctgtttggtggaata
atcgaaaaaggactggtcacttatatggcactaggtttggccctgcgatacgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttcgatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaagcc
caggcccaggcccaggttccagcaaaagctccccttgctggccaggttagcactatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatacaacaaatatagatacattgcttgtg
gccacagatcaaactgagagaatcgtagagcccccagaaaatatccaggagaaaattgct
tttatcttcaacaacctttcccagtcaaatatgacacaaaaggttgaagaactaaaggaa
actgtgaaggaagaatttatgccttgggtttcacagtacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattctaacttccttgacacgctgaagaatcctgag
tttaataagatggttctgaatgagacttatagaaacatcaaagtactcctgacttctgat
aaagctgcagccaatttctctgatcggtctttgctgaagaacttgggacattggctagga
atgattacactagctaaaaataaacccatcttacacactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacagcaagagttgctctatgtagtgccctttgttgcc
aaagtcttagaatctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gctattatgaatgtattagctgagctacatcaagaacatgacttaaagttaaacttgaag
tttgaaattgaggtcctctgtaagaatcttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctgaagaacttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaggagctccctcctatcacaaccacaacaacttctacaaca
ccagctaccagcaccacctgtacagccactgttccaccacagccacagtacagttaccat
gacatcaatgtctattccctcgcaggcctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccatccacagctgaagcagtgtgtgcgccaagcaatcgaacgggct
gtccaggagctggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaagattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcggaacttgacagctggaatggctatgattacttgcagggaacct
ttactcatgagcatatcaaccaacctgaaaaacagttttgcctcagcccttcgtactgca
agcccacaacaaagggaaatgatggatcaggcagctgctcaattagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgaaggtat
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagagtttgcacgcaatgtgcct
ggcttcttgcctacaaatgatttaagtcagcccacaggatttttagcccagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgtattacagaactggag
cagcatcttcacgctatcccgccaactttggccatgaacccccaagctcaggccctcaga
agtcttctggaggttgtagtattatcacggaactctcgagatgccattgctgctcttgga
ttgctccagaaggctgtagagggcttactggatgccaccagtggtgctgatgctgacctc
cttcttcgctacagagagtgccacctcttggtcttgaaagctcttcaagatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgagtgtcgggatgaa
tacaaatataatgtggaggcagtggagttgctaattcgcaatcatttggtcaacatgcaa
cagtatgatcttcaccttgctcagtcaatggagaatggtttaaactacatggctgtggca
tttgctatgcaattggtaaaaatactgctggtggatgaaaggagtgttgcccatgttact
gaggcagatctgttccacaccattgaaaccctcatgaggattaatgctcactccagaggc
aatgctcctgaaggattgccccaactgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtatgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggtcgtgacagtaccaaagctttctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaagactgatgacctcataacaaggttctttcgt
ctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggcagagcagcagcacaat
cctgctgctaatcccaccatgatccgagccaagtgctatcacaacctggatgcctttgtc
cgactcattgcactgctagtaaagcactcaggggaggccaccaacactgtcacaaagatt
aatctgctgaataaggtcctcggtatagtagtgggagttctcctacaggatcatgatgtt
cggcaaagtgaatttcagcaacttccctaccaccgaatttttatcatgctgctcttggaa
ctcaatgcacctgagcatgtgttggaaaccattaatttccagacacttacagctttctgc
aacacattccacattttgaggcctaccaaagctcctggctttgtgtatgcttggcttgaa
ctgatctcccatcggatatttattgcaagaatgctggcacacacgccacagcagaaggga
tggcctatgtatgcacagttactgattgatttattcaaatatttagcgcctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaagggtgctgctg
gttcttttgcatgattttcctgagttcctttgtgattaccattatggattttgtgacgtg
atcccacctaattgtatccagctaagaaatctgatcctgagtgccttcccaagaaacatg
aggctcccagacccattcactcctaatctgaaggtggatatgttgagtgaaattaacatc
gctccccggattctcaccaattttactggagtgatgccacctcaattcaaaaaggatttg
gattcctatcttaaaactcgatcacctgtcactttcctgtctgatctgcgcagcaaccta
caggtatccaatgagcctggtaatcgctacaacctccagctcattaatgcactggtgctc
tatgtagggactcaggccattgcacacatccacaacaagggcagcacaccttcaatgagc
accatcacgcactcagctcacatggacatctttcagaacctggctgtggatttggacact
gaaggtcggtatctcttcttgaatgcaattgcaaatcagctgcggtacccaaatagccac
actcactacttcagctgcaccatgctgtacctttttgcagaggccaacactgaagctatt
caagaacagatcacaagggttcttttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgagctgattaaaaatccagcatttaaattctggaaccat
gaatttgtacactgtgccccagaaattgaaaagttattccagtccgtcgcacagtgctgc
atgggacaaaagcaggctcagcaagtaatggaagggacaggtgccagttag
DBGET
integrated database retrieval system
