Bos mutus (wild yak): 102267876
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Entry
102267876 CDS
T02919
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
bom
Bos mutus (wild yak)
Pathway
bom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102267876 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102267876 (SKIC3)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102267876 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_17
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_11
ANAPC3
TPR_9
ARM_TT21_C
Sel1
ARM_TT21_2nd
TPR_15
ARM_TT21_5th
TPR_6
Fis1_TPR_C
TPR_20
TPR_30
TPR_5
BTAD
Retrotran_gag_2
Coatomer_E
DUF7017
Vps39_1
Motif
Other DBs
NCBI-GeneID:
102267876
NCBI-ProteinID:
XP_005899367
UniProt:
L8IBM2
LinkDB
All DBs
Position
7:complement(25992345..26093989)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELHQLWRKLTQLLAECTEDQNNETQQ
LLLTAFENALGLSDKIPSEDHQVLYKHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLTDEGEQYCCRLVEMDPQSGTGLIGLGIKALQDKKYEDAVRNLTEGIK
ESPLCTAGWYHLAEAQVRMHKPKEAVLSCNQALKNIDNLGVSGGSLHQKNLCLRLKAEAL
IKLSDYESSEEAIRTLDQVSDANNIPGLLVLKGLAYLNKGSLDEASKIMEDLLSSYPDLT
EVHALEALIHFTKKDYLQAEKCFQQALEKDPEVAEYHYQLGLTYWSMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYKDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQTLGKYKEAVAQYQLIIK
KKEDYVPALKGLGECHLLLAKAALVDYLDGKAVDYIEKALEYFTRALQHRADVSCLWKLV
GDACTSLSAVSPSKVNVSVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLADTGSNSDDLQELLEKSMHCLKKAVRLDSNNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLICWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNILQMN
AIPAAQVVLSKYVERIQNYAPAFTMLGYLNEHLQLKKEAANAYHRAILLLQTAEDRDAYY
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALTI
VESEQDKAHILTALAIAEYKQGKTDVAKTLLFKCSILKEPTTESLQALCALGLAMQDATL
SKAALNELLKHSKPNSDYQRSLLTSAICALQGRSVAVQRQASKAVHSNPADPALWSLLSR
VVAQYTQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSNSAEDEKNTALKTIQK
AALLSPGDPAVWAGLMAACHADDILALVSSTQPKRMDLYLALLSAVSASIKDREFFENYN
QSLERWSLSQAVTGLIDTGRISKAEALCTKNLKSNPDQPAIILLLRQVQCKPLLESRKPL
PDTVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLS
SLLRLALLALEVCMANVSNDHWPSLVQEATAEALKLCFCPLAVLLQALLQFKRKMGARET
RRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQKL
SSE
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctgaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaagaataactat
aatgcctgggtttttattggcgttgctgcagctgagctagaacagcctgatcaggcccag
ggtgcctacaagaaagctgctgaattagagccagaccagctactagcttggcaggggtta
gcaagtttgtatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtttac
caaaagctcctggatctgtatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaactggtggatctgtattaccaagaaaagaaacacgtagaggtggcccgaacatggcac
aaattgataaagacacgacaggaagaaggtgcagacaaccaggagcttcatcagctgtgg
aggaaattgactcagttgctggctgagtgcactgaggaccagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcattgggcttatcagataagattcctagcgaagat
caccaagtgctttataaacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttacatttaattgaatcaggaagtcttactgatgagggagaacagtat
tgttgtagactagtggaaatggatccccaaagtggtacaggtctcataggtttaggcatt
aaagcattacaagacaaaaagtacgaagatgctgttaggaacttaacagaagggataaag
gaaagccccctctgcacagctggatggtatcatctagcagaagcccaagtaagaatgcat
aaacctaaggaagctgttctttcatgcaaccaagctctgaagaatatagataatcttggt
gtgtctggtggcagtctgcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagaggaagcaattcgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttctcaaaggcttggcctatctaaacaagggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctaact
gaagtgcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagcaagctcttgaaaaagatcctgaagttgctgaatatcattaccaactt
gggttaacatattggtccatgggtgaagaaacaagaaaagataaaacaaaggctctgacc
cactttttaaaggctgccaaactggatacatacatgggcaaagttttctgctatttaggt
cattattacaaagatgtagtaggtgataaaaacagggcccgtggatgttataggaaagct
tttgaattggatgacaccgatgctgaatctggagctgcagcagttgacttaagtgtcgag
cttgaagagatggaaactgccttagctatcctgacaacagtcactcaaaaggcaagtgct
gggacggcaaagtgggcctggctgaggcgaggcctatactatctgaaagctggtcagcat
tcccaagcagtggctgatttacaggcagcattaagggcagacccgaaggacttcaattgt
tgggagtcattaggagaggcatatttaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagcgagctgaacccagaatccacatacagtgtgtttaaggtggcggca
atacagcaaaccctcggcaaatacaaagaggcggtagctcagtaccagctgatcattaaa
aagaaagaagattatgtgcctgctctgaaaggtttgggtgaatgccacctcctgttggca
aaagcagctctagtcgattatcttgatgggaaagctgtagactacatagagaaagcactg
gaatattttactcgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtacctctctgtctgctgtctcaccatctaaagtgaatgtcagtgtctta
ggagttcttctaggtcagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
cttggaggaagatgttacggtcgtgcattaaaactgatgtctacatctaatacgtggtgt
gaccttggaattaattattatcgccaagcgcaacatctagcagacacaggcagcaactca
gatgaccttcaagagttactggagaaatctatgcattgtctgaaaaaagctgtgagactt
gacagtaataatcacttatactggaatgctcttggtgtagtttcctgttatagtggtatt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccagtcagaacaaattaat
gctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaaaattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttaatatgctggattgga
caagctctaattgcagagacagttggaagttacgacaccatggatctgttcaggcacact
acagaactcagtatgcacactgagggagcaataggttatgcgtattgggtctgtacaaca
ttgcaagataagagcaacagagacacagagctgtaccggtataacatcctccagatgaat
gcaattccagcagcacaagtggtcttgagtaaatacgtggagagaattcagaattatgct
cccgctttcacaatgttgggttacttaaatgaacatctacagctgaagaaggaagcagca
aatgcgtaccacagggcaattttgttgttacagactgcagaagaccgagatgcttattat
gttacagtaagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaggagttagaagacatcataggtttcgcattagct
ttatttatgaagggtctgtataaggagagcagcaaagcgtatgagagagccttgactatt
gttgaatcggagcaagacaaagctcatatcttgacagctctggcaatagcagagtataaa
caaggaaaaacggacgtagccaagacattgctattcaaatgctctatcttaaaggaacca
acaacggaaagccttcaagccctgtgtgctctcggattggcaatgcaggatgctacactg
tcaaaggctgcccttaatgagttactgaagcacagcaaaccgaacagtgactatcagagg
agccttcttacatcagccatctgtgccctgcaaggccgcagcgtggcagtgcagagacaa
gcgtccaaagctgttcacagtaacccagctgatcctgctctttggtccctgttgtcccga
gtggttgcccagtatactcaacgaaatgcaaagggaggtgcagtggcaggaaacgtggct
catattctggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcagttg
gctatgggaagcaattcagcagaagatgagaaaaatactgcactaaagaccattcagaag
gcagctctcctttctccaggtgatcctgctgtctgggctgggctgatggcagcttgtcat
gctgatgatatactggctctagtgagcagcactcagccaaagaggatggatttatacttg
gcactgttgtctgctgtttctgcttcaattaaagacagagaattctttgaaaattacaac
cagtctcttgaaaggtggtctctctctcaagctgtcactggtctaatagacacaggaaga
atatccaaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcaaccagct
attatcttactcttgagacaagttcaatgtaaaccactcctggagtcacgaaaacctctc
ccagacactgtacttgaagagctgcaaaaaacagtcatgtccaactcaacctctgttccc
gcttggcagtggctggcacatatatatcagtcccaaggaatgatgggtgctgcagagatg
tgttacaggaagagcctgcaagtagcatcccagcagggcagctggagtgggaagctctca
agcctgctgaggctagcactgcttgcactggaagtctgcatggctaatgtttccaatgat
cactggccatccttggttcaagaggctacagctgaggccctgaaactttgcttttgtcca
ctggctgtccttttacaagctttgttacaattcaaacgcaaaatgggagcaagagagaca
cgacgacttttggagagagttgtgtatcagcctggatatcccaaatctattgtttcaaca
gcacgttggtaccttctgagacacttacatgccaaaaatgactacgagctcattgatgtg
ctggtaaacaatgccaaaactcatggagatacaagagcattggaactgaatcagaagttg
tcctcagaataa
DBGET
integrated database retrieval system