Cytobacillus oceanisediminis: A361_22305
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Entry
A361_22305 CDS
T04330
Name
(GenBank) penicillin binding protein PBP4B
KO
K21469
serine-type D-Ala-D-Ala carboxypeptidase [EC:
3.4.16.4
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon00550
Peptidoglycan biosynthesis
bon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A361_22305
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bon01002
]
A361_22305
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bon01011
]
A361_22305
Enzymes [BR:
bon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A361_22305
Peptidases and inhibitors [BR:
bon01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
A361_22305
Peptidoglycan biosynthesis and degradation proteins [BR:
bon01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
A361_22305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AND41777
UniProt:
A0A160MF33
LinkDB
All DBs
Position
complement(4441489..4442880)
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AA seq
463 aa
AA seq
DB search
MKRFITRLTVLGLVLSLLLPYPIAALGVELGTTDSSSSEEQVFKHKKPLEYPTLSKAKRP
EDAGFSSKRLKEVDKLIEGEIENGFPGAALVVIKDGKIVKNSAYGSAKIFDKTDPLTHPQ
KMKTKTMFDLASNTKMYAVNFSLQHLVTEGKINLEEKIQHYFPAFKDSADDEIKGKGELR
IIDLLHHTAGFPSSIHYHNPERAGELYSQERSKTLSMILKTPLQYEPGTKQVYSDIDYML
LGFIIEKITGMQLDHYTENHIYKPLGLKHTLFNPLRKGFKEKDFAATELHGNTRDGVISF
PNIRIYTLQGEVHDEKSFYSMDGISGHAGLFSTTSDLAVLMQVMLNDGGYGNVKLFDKRT
IDEFVEPYDMNPTYGLGWRLNGDSSMEWMFSQYAGKKVFGHTGWTGTVTVIDRENNLAIA
LLTNKKHSPVIDPLKDPHKFQGDTYSISQYGSVISAVYEALND
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtttataacacgcttaacagttttaggcctggtgttgagtttgcttttgcct
tatcccattgcagccttaggagtggaattgggcacaacagatagcagcagttcagaagag
caagtctttaaacataaaaaaccattagaatatccaaccttgtcaaaagcaaagcgcccc
gaggatgcaggcttttcttccaaaaggctcaaagaggttgataagctgatcgagggagaa
atagaaaatggttttccaggagcagctttagtcgtaattaaagatggaaagattgttaaa
aactccgcatatggttcagccaaaatatttgataaaactgatccattaactcacccgcag
aaaatgaagacaaaaaccatgtttgacttagcatcaaacacgaaaatgtatgccgttaac
ttttcactgcagcatcttgtcactgaaggtaagatcaatcttgaagaaaaaattcagcat
tattttcctgcatttaaagattcagcggacgatgaaataaaagggaaaggtgaactccgg
ataatcgacttgcttcatcatactgccggatttccttcaagcatccattatcataatcct
gaaagggcgggagaattgtattcccaggaacgcagtaaaacgctttccatgattttaaaa
actccccttcagtatgaacctggcaccaaacaggtttacagtgacattgactatatgctg
ctgggatttattattgaaaaaataacgggaatgcagctggaccattatactgagaatcat
atctataagcccttagggttaaagcatactttatttaatccgctccgcaagggtttcaaa
gaaaaggatttcgctgcaactgaattacacggcaacaccagggatggggtcatttccttc
cctaatatccggatctatactctccagggagaggttcatgatgagaagtctttttattca
atggatggaatatccgggcatgctggcctcttttccacaacttcagatcttgctgtcctg
atgcaggtgatgcttaatgatggaggctatggaaatgtaaagttatttgataaacgcaca
attgatgagtttgtagaaccatatgatatgaaccctacatatgggttaggatggcgtttg
aacggagattcaagtatggagtggatgttcagccagtatgccgggaaaaaagtttttgga
catactggctggacaggaacggtaacggtgatagacagggaaaataatttagctatcgct
ctcctgacaaataaaaaacattctccagtcatcgatccattaaaagatccgcataagttt
caaggtgacacatacagcatcagtcaatatggaagtgtaatttcagcggtttatgaagca
ttaaatgactaa
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