Rhodophyticola sp. CCM32: E2K80_02270
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Entry
E2K80_02270 CDS
T05925
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2K80_02270 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_02270 (uvrB)
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2K80_02270 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2K80_02270 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
AAA_16
eIF3_p135
AAA
DUF87
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QBX99692
UniProt:
A0A4V1BQM5
LinkDB
All DBs
Position
complement(451900..454098)
Genome browser
AA seq
732 aa
AA seq
DB search
MHNNSPEQMPVLNRSVDEIRARAKLEGGKSFILHTEFDPAGDQPAAIAELTGGIREGDQN
QVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYD
YYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETY
GAMTQDLISGTEYDQRKVMADLIAQQYRRNDAAFQRGSFRVRGDSLEIWPAHLDDRAWKL
SFFGEELESITEFDPLTGEKTDTFEKVRIYANSHYVTPRPTMQQAIKGIKSELQTRLDQL
VGDGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAI
VFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSA
TPQSWELDQSGGVFTEQVIRPTGLLDPMVEIRPVGMQVDDLLDEVRRVTADGFRTLVTTL
TKRMAEDLSEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPE
CGLVAILDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERAMRETDRRRAK
QIAYNTENGITPETVKKNVEDILAGLYKGDVDMNRVTAKVEKPLHGANLEAVLNGLRADM
RKAAENLEFEEAARLRDEVKRLETVDMVVSDDPLARQTAVDQAVSTANKMSGRSTAGRPG
QRAGKPRRKKGR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaactcccccgaacagatgcccgtcctgaatcgctcggttgatgaaatccgc
gcgcgcgccaagctggaagggggtaaaagcttcattctgcacacggaatttgaccccgcc
ggtgaccagccggcggccatcgcggaactgaccggagggattcgtgaaggtgatcagaat
caggtgctgttgggcgcaaccggcaccggcaagaccttcaccatggccaaggtgattgaa
gaaacccagcgccccgccatcattctggccccgaacaagacattggcagcacaactttac
ggcgagttcaaaggcttcttccccgagaacgcggtggaatatttcgtcagctattatgac
tactaccagcccgaggcctatgtggcccggtccgacacctatatcgagaaagaaagccag
atcaacgaacagatcgaccggatgcgccattcggccacccgcgcgcttctggaacgcgat
gacgtgatcattgtcgcctcggtctcctgcatctacggcatcggctcggtcgagacctat
ggcgcgatgacgcaagacctgatttcaggcacggaatatgaccagcgcaaggtcatggcc
gatctgattgcccagcaataccgccgcaacgacgccgcgtttcagcggggcagtttccgg
gtccggggcgacagtctggaaatctggcccgcccatctggatgaccgcgcctggaagctc
agcttttttggcgaggagctggaaagcatcaccgaattcgaccccctgaccggagagaag
accgacacgttcgaaaaggtccgtatctatgcgaattctcactatgtaaccccgcgcccg
accatgcagcaggcgatcaagggcatcaaatccgaattgcagactcgccttgatcaactg
gtcggcgatggcaaactgctggaggcccagcgactggagcagcgcacgaatttcgatctt
gagatgctggaggccaccggcgtctgcaacgggatcgagaattattcccgctacctgacc
ggccgggcgcccggcgaaccgccccccacgctttttgaatacatccccgataatgcgatt
gtctttgccgatgaatcccatgtctcggtgccgcagatcggcggtatgtatcgcggggac
tatcggcgcaaattcaccctggccgaacacgggttccgcctgccctcctgcatggataac
cggcctctgaaattcgaggaatgggatgcgatgcgcccgcaatcggtgttcgtgtccgcc
accccgcaatcctgggaactggaccaatccggcggcgtcttcaccgaacaggtgatccgc
cccaccggcctgctggacccgatggttgaaatccgacccgtcgggatgcaggtcgatgat
ctgctggatgaggtgcgccgcgtcaccgccgatgggttccgcacactggtcaccacgctg
accaaacgcatggccgaagacctgagcgaatacatgcatgaacagggcatcaaggtccgc
tacatgcattccgatatcgacacgctggaacggatcgagattctgcgcgacctgcgcctt
ggcgccttcgacgtgctgatcgggatcaacctgctgcgcgaggggctcgacattcccgaa
tgcgggctggtggccattctggatgcggataaagaggggtttctgcgctcggaaacctcg
ctggtgcagaccatcgggcgcgcggcgcgcaacgccgagggccgggtgatcatgtatgcc
gaccgcatcaccggctcgatggaacgcgcgatgcgcgaaaccgaccggcggcgcgccaag
cagatcgcctataacaccgaaaatgggatcacgcctgaaaccgtgaagaagaatgtcgag
gatattctggccggtctctacaagggcgatgtggatatgaaccgggtgaccgccaaggtc
gaaaaaccgcttcatggtgccaatctggaggcggtgctgaacgggttgcgcgcggatatg
cgcaaggcggcggaaaatctggaattcgaagaggccgcccggctgagggatgaggtcaaa
cggctggaaaccgtggatatggtggtgtccgatgatccgctggcacggcagactgcggtg
gatcaggcggtcagcacagccaataagatgagcgggcggtcaaccgcaggccggccgggg
caacgcgcgggcaagccacggcgcaaaaaggggcgctga
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