Bosea sp. PAMC 26642: AXW83_08660
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Entry
AXW83_08660 CDS
T04264
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bop
Bosea sp. PAMC 26642
Pathway
bop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXW83_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bop03021
]
AXW83_08660
03400 DNA repair and recombination proteins [BR:
bop03400
]
AXW83_08660
Enzymes [BR:
bop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXW83_08660
Transcription machinery [BR:
bop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXW83_08660
DNA repair and recombination proteins [BR:
bop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXW83_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Microp_apicomplexa_15
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AMJ60353
LinkDB
All DBs
Position
complement(1833860..1838011)
Genome browser
AA seq
1383 aa
AA seq
DB search
MVNSLQGRRRVRKFFGKLKEVAQMPNLIEVQKASYDQFLMVEEPKGGRGDEGLQSVFRSV
FPIGDFSGASLLEFVKYTFEPPKYDVDECRQRGMTFSAPLKVTLRLIVFDIDPDTQAKSV
KDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RIIPYRGSWLDIEFDAKDIVYARIDRKRKIPVTSLLFALGMDGEEILSRFYAHITYVRDG
KGWRVPYDAERMKGFKATVDLIDADTGEVVVEAGKKLVARTARQLAEKGLKFLRATDEDL
VGQYIAEDIVDPETGEVHAEAGEELTMAAEAKTGDIKGNLVDLIAKGYDEITVLDIDHIT
VGPYIRNTLTVDKNSRREEALFDIYRVMRPGEPPTLETAENMFQSLFFDSERYDLSAVGR
VKMNMRLDLDAEDTVRILRKEDIFAVVKALVDLRDGKGEIDDIDHLGNRRVRSVGELMEN
QYRLGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLS
EVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVN
KYGFIESPYRRIRDGKQTDEIIYLSAMEEAKYNVAQANAAVDKEGRLTDDLIVCRRAGEV
IVTPVDKVDFQDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGT
GMEAVVARDSGAAIAARRSGVVDQVDATRIVIRASDEMDPTKPGVDIYRLQKFQRSNQST
CITQRPLVRVGDIIKKGDIVADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSEKIV
SDDIFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVAAGDIL
VGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDE
RAQAIEREEIERLAKDRDDEQAILDRNTFARLGDILTGKTGLAGPKGFKKDTVITREGMT
EFPRSQWWLFATGDDALMTEIEAMRKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMV
KVFVAVKRKIQPGDKMAGRHGNKGVVSRIVAAEDMPFLEDGTHADIVLNPLGVPSRMNVG
QILETHLGWAAAGLGKQIGAALDAYKKSNDYKALRASFEAVYEDNEIIASMDETELVEMG
QNLRRGVPMATPVFNGAKEADIERLLEQAGLHSSGQSTLYDGRTGEPFDRKVTMGYIYML
KLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTV
KSDDVAGRTKVYESIVRGEDNFEAGIPESFNVLVKEMRSLGLNVELINNKPKTGELPPAE
AAE
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggtcaattcgctccagggccgcaggcgcgtccgcaagttcttcggaaagctcaaggaa
gtcgcgcagatgccgaacctcatcgaggttcagaaggcgtcatacgaccagttcctgatg
gtcgaggagcccaagggcggccgcggcgacgaaggcctgcagtccgtcttccgctcggtg
ttcccgatcggcgatttctcgggcgcctcgctgctcgaattcgtcaaatacaccttcgag
ccgccgaaatacgacgtcgacgagtgccgccagcgcggtatgaccttctcggccccgctc
aaggtgacgctgcgcctgatcgtgttcgatatcgatcccgacacccaggcgaagtcggtc
aaggacatcaaggagcaggatgtctacatgggcgacatgccgctcatgaccgacaacggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccgggc
gtgttcttcgaccacgacaagggcaagacccactcttcgggcaagctgctcttcgccgcg
cgcatcatcccctatcgcggctcctggctcgacatcgagttcgacgccaaggacatcgtc
tacgcgcgcatcgaccggaagcgtaagattcccgtcacatcgctgctgtttgcgctcggc
atggacggcgaggagatcctcagccgcttctatgcgcacatcacctatgtccgcgacggc
aagggctggcgcgttccctacgatgccgagcgcatgaagggcttcaaggcgaccgtcgac
ctgatcgacgccgataccggcgaggtcgtggtcgaggccggcaagaagctcgttgcccgc
accgcgcgccagcttgctgaaaagggcctcaagttcctgcgcgcgaccgacgaggatctc
gtcggccagtacatcgccgaggacatcgtcgaccccgagaccggcgaagttcatgccgag
gccggcgaagagctgacaatggccgccgaggccaagaccggcgacatcaagggcaatctc
gtcgatctgatcgccaagggctacgacgagatcacggtgctcgacatcgaccacatcacg
gtcggcccctatatccgcaacacgcttaccgtggacaagaactcgcgccgggaagaggcg
ctgttcgacatctatcgcgtgatgcgtcccggcgagccgccgacgcttgagactgccgag
aacatgttccagtcgctgttcttcgactcggagcgctacgacctgtcggccgtcggccgc
gtcaagatgaacatgcgcctcgacctcgacgccgaggacaccgtccggatcctccgcaag
gaggacatcttcgcggtcgtcaaggcgctggtcgatctgcgcgacggcaagggcgagatc
gacgacatcgaccatctcggcaaccgccgcgtgcgttcggtcggcgagctgatggagaac
cagtatcgcctgggcctcctgcgcatggagcgcgccatcaaggagcggatgtcctcggtc
gatatcgacacggtgatgccgcaggacctcatcaacgccaagccggcggccgcagcggtg
cgcgaattcttcggctcgtcgcagctgtcgcagttcatggaccagacgaacccgctctcg
gaagtcactcacaagcgtcgtctttcggcgcttggacccggtggtctgacccgcgagcgc
gccggcttcgaggtgcgcgacgtgcacccgacgcattacggccgcatctgcccgatcgag
acgccggaaggcccgaatatcggactgattaactcgctcgccaccttcgcgcgggtgaac
aagtacggcttcatcgagagcccctatcgccgcatccgcgacggcaagcagaccgacgag
atcatctatctctcggcgatggaggaggcgaagtacaacgtcgcccaggccaacgcagcc
gtggacaaggaaggccgtcttaccgacgacctgatcgtctgccgtcgcgccggtgaggtg
atcgtgacgccggtcgacaaggtcgatttccaggacgtgtcgcccaagcagctcgtctcg
gtcgccgcggcgctgatcccgttcctcgagaacgacgacgccaaccgcgcgctgatgggc
tcgaacatgcagcgccaggcggtgccgctggttcgtgccgacgcgcccttcgtcggcacc
ggcatggaagccgtcgtcgcccgtgactcgggtgcagcgatcgccgcgcgccgctccggc
gtggtcgaccaggtcgatgcgacgcgtatcgtcatccgcgcgtcggacgagatggacccg
accaagcccggcgtcgacatctaccgtctgcagaagttccagcgctcgaaccagtctacc
tgcatcacgcagcgtccgctggtgcgcgtcggcgacatcatcaagaagggtgacatcgtc
gcggacggcccgtcgaccgagttcggcgagcttgctctcggccgcaacgtgctcgtcgcg
ttcatgccgtggaacggctacaacttcgaggactcgatcctgctctcggagaagatcgtc
tctgacgacatctttacctcgatccatatcgaggaattcgaggtcatggcccgcgacacc
aagctcgggccggaggaaatcacgcgcgatattccgaacgtttcggaagaggcgctgaag
aacctcgacgaggccggcatcgtctatatcggcgcggaagtggcggccggcgacattctc
gtcggcaagatcacgcccaagggcgaaagcccgatgacgccggaagagaagctgctgcgc
gccatcttcggcgagaaggcctccgacgtccgcgacacctcgctgcgggttccgcccggc
gtgcagggcacgatcgtggaagtgcgcgtgttcaaccgccatggcgtcgacaaggacgag
cgcgcccaggcgatcgaacgcgaggagatcgagcgtctcgccaaggaccgcgacgacgag
caggcgatcctggaccgcaacaccttcgcgcgtctcggcgacatcctgaccggcaagacc
ggtctcgccggtcccaagggcttcaagaaggacacggtcatcacccgcgagggcatgacc
gagttcccgcgctcgcagtggtggctgttcgccaccggcgacgacgccctgatgaccgaa
atcgaggcgatgcggaagcagtacgacgagtcgaagaagcgcctcgagcagcgcttcctc
gacaaggtcgagaagctgcagcgcggcgacgagctgcctccgggcgtgatgaagatggtc
aaggtcttcgtcgcggtgaagcgcaagatccagccgggcgacaagatggccggccgccac
ggcaacaagggcgtggtctcgcgcatcgtggctgccgaggacatgcccttcctcgaggac
ggcacccatgccgacatcgtgctcaacccgctcggcgtgccctcgcgcatgaatgtcggc
cagattctggagacccatctcggatgggccgccgcaggtctgggcaagcagatcggcgcg
gcgctcgacgcttacaagaagtcgaacgactacaaggcgctgcgtgcctcgttcgaagcc
gtctacgaggacaacgagatcatcgcctcgatggacgagaccgagctcgtcgagatgggc
cagaacctgcgccgcggcgtgccgatggcgacaccggtgttcaacggcgccaaggaggcc
gatatcgagcggctgctggagcaggcgggtctgcactcgtcgggtcagtcgacgctctat
gacggccgcaccggcgagcccttcgaccgcaaggtgacgatgggctacatctacatgctc
aagctgcaccatctggtcgacgacaagatccatgcccgttcgatcggcccgtactcgctc
gtcacccagcagccgctgggcggcaaggcgcagttcggcggacagcgcttcggcgagatg
gaggtctgggcgctggaagcctatggcgccgcctacacgctgcaggagatgctgacggtg
aagtcggacgacgtcgcgggccgcaccaaggtctacgagtcgatcgtgcgcggcgaggac
aacttcgaggcgggcattcccgagagcttcaacgtgctcgtcaaggaaatgcgctcgctc
ggcctcaatgtcgaactgatcaacaacaagcccaagaccggcgagttgccgccggccgaa
gcggccgaataa
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