Bipolaris oryzae: COCMIDRAFT_106162
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Entry
COCMIDRAFT_106162 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
bor
Bipolaris oryzae
Pathway
bor03015
mRNA surveillance pathway
bor04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCMIDRAFT_106162
09140 Cellular Processes
09143 Cell growth and death
04113 Meiosis - yeast
COCMIDRAFT_106162
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bor01009
]
COCMIDRAFT_106162
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_106162
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_106162
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_106162
Enzymes [BR:
bor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
COCMIDRAFT_106162
Protein phosphatases and associated proteins [BR:
bor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
COCMIDRAFT_106162
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
COCMIDRAFT_106162
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
COCMIDRAFT_106162
Spliceosome [BR:
bor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
COCMIDRAFT_106162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
19118812
NCBI-ProteinID:
XP_007692042
JGI:
Cocmi1_106162
UniProt:
W6ZCI4
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MAETEVDLDSIIDRLLEVRGSRPGKQVQLLETEIRYLCTKAREIFISQPILLELEAPIKI
CGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFVL
RGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLN
SMEQIRRVMRPTDIPDCGLLCDLLWSDPDKDITGWSENDRGVSFTFGPDVVSRFLQKHDM
DLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEK
KQKYVPNLGRPASGGKKR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaccgaggtggacttggactctatcatagaccgcctgctcgaggtccgcggc
agcagacccggcaagcaggtccagctcctcgaaaccgagatccgctacctgtgcaccaag
gctcgcgaaatcttcatctcacagcccatcctgctcgagctcgaggcaccgataaagatt
tgcggagatatccacggccagtactacgatctgctacggctgtttgagtatggcggcttc
cccccagaggcaaactacctcttcctcggcgactacgtcgaccgtggcaagcagtcgctc
gagacgatatgccttctcctcgcgtacaagatcaagtaccccgagaactttttcgttctg
cgtggcaaccacgagtgcgcctccatcaaccgcatctacggattctacgacgagtgcaaa
cggagatacaacatcaagctatggaagacttttaccgactgcttcaactgtctgcccatt
gccgccattattgacgagaagatcttcaccatgcacggtggcctgagcccagatctaaac
tcaatggagcagattaggcgtgtcatgcgacctaccgatattcccgattgcggtcttttg
tgcgatctgctgtggtccgacccagacaaggacattacgggatggagtgagaacgaccgt
ggtgtaagctttacgtttgggcccgacgttgtgtctcgtttcctgcaaaagcacgacatg
gacctgatttgccgtgcgcatcaagtcgtagaagatggctacgagttcttctccaagcgt
cagcttgtgacactgttcagtgcacccaactactgcggcgaattcgacaatgcaggcgca
atgatgagcgtcgatgagagtctgttgtgctcgttccagattctcaagcctgcagagaag
aaacaaaagtatgtccccaatctcggtagacctgcgtctggcggcaaaaagcgctag
DBGET
integrated database retrieval system
