Bipolaris oryzae: COCMIDRAFT_6900
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Entry
COCMIDRAFT_6900 CDS
T03125
Name
(RefSeq) glycoside hydrolase family 20 protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
bor
Bipolaris oryzae
Pathway
bor00511
Other glycan degradation
bor00513
Various types of N-glycan biosynthesis
bor00520
Amino sugar and nucleotide sugar metabolism
bor00531
Glycosaminoglycan degradation
bor00600
Sphingolipid metabolism
bor00603
Glycosphingolipid biosynthesis - globo and isoglobo series
bor00604
Glycosphingolipid biosynthesis - ganglio series
bor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
COCMIDRAFT_6900
09103 Lipid metabolism
00600 Sphingolipid metabolism
COCMIDRAFT_6900
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
COCMIDRAFT_6900
00531 Glycosaminoglycan degradation
COCMIDRAFT_6900
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
COCMIDRAFT_6900
00604 Glycosphingolipid biosynthesis - ganglio series
COCMIDRAFT_6900
00511 Other glycan degradation
COCMIDRAFT_6900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bor03110
]
COCMIDRAFT_6900
Enzymes [BR:
bor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
COCMIDRAFT_6900
Chaperones and folding catalysts [BR:
bor03110
]
Intramolecular chaperones
Others
COCMIDRAFT_6900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
19125121
NCBI-ProteinID:
XP_007689789
JGI:
Cocmi1_6900
UniProt:
W6Z1T5
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MRDLTLASVLTASALFARRTGAVAVNPLPKPASITWGDSGCFAVGSITLDGPDNKVLSDA
FSRMTKTVTDLKWIPAGIEAPVREFEPFPKSGSKKKRRRRNTSTTVSAGNCTGTISTVKV
DIADTSAQLQHGVDESYKLELAAGSSSVHISAGTVYGALHALTTMQQIVINDGSGKLIIE
QPVSIDDKPLYPVRGIMIDSGRNYISKAKILEQIDGMALSKLNVLHWHMVDTQSWPIEIK
SYPDMTKDAYSANEVYSQTVLKEIVEYAGARGVRVIPEIDMPGHASSGWEEIDKEILTCE
DSWWSNDDWPLHTAVQPNPGQLDILNNKTYEVTGKVYKELATIFPDNWFHIGGDELFMNC
NNFSSLARDFFATGKTMGDLYQVWVDRALPNFRSQVNKTFIMWEDVKISASVAATGNVPK
DIILQAWNNGLGHISNLTSQGYRVIVSSSDFMYLDCGYGGYVSNDPRYNVMVNPNAADGA
ANFNWGGNGGSWCAPYKTWQRIYDYDFTQGLSATQKSLVQGAIAPLFGEQVDSVVISQKI
WPRAAALAELVWSGNRDKDGNKRTTELTQRILNFREYLVANGVQATILMPKYCLQNPHTC
DLYLNQTVIS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacctcaccctggcctcagtcctgacggcctcagccttgttcgcccgacgaact
ggagctgttgctgtcaaccctcttcccaagcctgccagcattacctggggcgactcagga
tgctttgccgtcggatcaatcactctggatggccccgacaacaaggtgctttctgatgca
ttcagccgaatgacaaagaccgtcaccgacctcaagtggatccctgcgggtatcgaggcc
ccagtcagggagtttgaacctttcccaaagagtgggtccaagaagaagaggaggaggagg
aatacttctactactgtctctgctggaaactgcacgggcactatcagcacagtcaaggtc
gacattgccgacaccagtgctcagcttcaacatggcgtcgacgaatcgtacaagcttgag
cttgctgctggatcaagcagcgtccacatctctgctggaaccgtctatggtgcccttcac
gccctgaccaccatgcagcaaatcgtcatcaacgacggctcaggcaagttgattattgaa
cagcccgtctccattgacgacaagcccctctaccctgtccgcggtatcatgatcgactct
ggccgcaactacatctccaaggccaagatcctcgagcagattgacggaatggcactttcc
aagctcaacgtccttcactggcacatggtcgacacgcagtcatggcccattgagatcaag
tcgtacccggatatgacaaaggatgcctactcagccaacgaggtctactcccaaaccgtt
ctcaaggaaatcgtcgagtacgccggtgcccgcggtgtgcgcgtcatcccagaaatcgac
atgccaggccatgccagctccggctgggaggaaatcgacaaggaaatcctaacctgtgag
gacagctggtggtccaacgacgactggccgctccacaccgccgtgcagcccaacccaggc
cagctcgacattctcaacaacaagacatacgaggtcaccggcaaggtgtacaaggaactc
gccaccatcttcccggacaactggttccacattggcggtgacgagctcttcatgaactgc
aacaacttctcctctctagcccgcgacttctttgccacgggcaaaacaatgggcgacctc
taccaagtctgggtcgaccgcgccttgcccaacttccgctcgcaggtcaacaaaaccttc
atcatgtgggaagacgtcaagatctcggcctctgtcgccgccaccggcaacgtccccaag
gacatcatcctgcaagcctggaacaacggcctcggccacatctccaacctcacctcccaa
ggctaccgcgtcatcgtctccagctccgacttcatgtacctcgactgcggctacggcggc
tacgtcagcaacgacccccgctacaacgtcatggtcaaccccaacgccgccgacggcgcc
gcaaacttcaactggggcggcaacggcggctcctggtgcgccccttacaaaacctggcag
cgcatctacgactacgacttcacccagggcctctccgccacccaaaaatccctcgtccaa
ggcgccattgcgcccttgttcggcgagcaagtcgactccgtcgtcatctcccagaaaatc
tggccccgtgctgccgccctcgccgaactcgtctggtccggcaacagggacaaggatggc
aacaagaggacgaccgagctcacccagcgcatcctcaactttagagagtatctcgttgcc
aatggcgttcaggctaccattctcatgccaaagtattgcttgcagaatccccatacctgc
gatttgtatcttaaccagacggttatttcgtaa
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