Bipolaris oryzae: COCMIDRAFT_90789
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Entry
COCMIDRAFT_90789 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
bor
Bipolaris oryzae
Pathway
bor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCMIDRAFT_90789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_90789
03012 Translation factors [BR:
bor03012
]
COCMIDRAFT_90789
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
COCMIDRAFT_90789
Translation factors [BR:
bor03012
]
Eukaryotic type
Release factors
COCMIDRAFT_90789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
19127752
NCBI-ProteinID:
XP_007686270
JGI:
Cocmi1_90789
UniProt:
W6Z655
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSGKNEQPNEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEFG
TASNIKSRVNRLSVLSAITSTQQRLKLYSKVPPNGLVVYCGEIITAEGKERKINIDFEPF
KPINTSLYLCDNKFHTEALSELLESDQKFGFIIMDGNGALFGTLSGNTREIVHKFSVDLP
KKHGRGGQSALRFARLREEKRHNYVRKVAELAVQNFITADKVNVAGIILAGSADFKNDLN
QSDLFDNRLQSKVIKVVDVSYGGENGFNQAIELAGETLSNVKFIQEKKLINEYFDHISKD
SGKVCYGIDDTLKALEAGAAETLIVFENLEITRWVLKSSAGSEIILHTTKLQEEDRSIFM
DKETGQEMEVIDQGSMLEWLAEKYRDFGANLEFVSDRSSEGNQFVKGFGGIGAILRYALN
FEQLAEVDDDEDEFYDD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaagaacgagcagcccaacgaggccgagaagaacattgagatctggaaggtc
aagaagctcatcaagcgtctcgaggccgcccgtggaaatggcacatccatgatttcgctc
atcatcccccccaaggatcagatctcacgcgccgccaaaatgttggctgaagagtttggc
actgcctccaacatcaaatcccgcgtcaaccgtctctctgtcctgtccgccatcacatcg
acccagcagcgtctgaagctctactccaaggtcccccccaatggcctcgttgtctactgc
ggtgaaatcatcaccgccgaaggcaaggagcgcaagatcaacattgactttgagcccttc
aagcccatcaacacctcgctatacctgtgtgacaacaagttccataccgaggccctgagc
gagctgctcgagtctgaccaaaagtttggtttcatcatcatggacggaaacggtgccctg
ttcggtactctgtcaggaaacacgcgtgaaattgtccacaagttctcggtcgaccttcct
aagaagcacggtcgtggtggtcagtccgctctgcgtttcgcccgtctgcgtgaagaaaag
cgccacaactacgtccgcaaggtcgccgaattggctgtccagaacttcatcaccgccgac
aaagtcaacgttgccggaatcattctcgctggttctgccgacttcaagaacgatctcaac
cagtcggacctcttcgacaaccgtctgcagtccaaagtcatcaaagttgtcgacgtgtcc
tacggaggcgaaaacggtttcaaccaggccattgaactcgcaggcgagactctcagtaac
gtcaagttcattcaagaaaagaagctcatcaacgagtactttgaccacatctccaaggac
tctggaaaggtctgctacggtatcgacgataccctcaaggccctcgaggctggtgcagcc
gagactctgattgtctttgaaaacttggaaatcactcgatgggttctcaagagctctgcc
ggttccgagatcatcctccacaccacaaagctccaggaagaggaccgaagcatcttcatg
gacaaggaaaccggacaggagatggaagtcattgatcagggttccatgctcgagtggctt
gccgaaaagtaccgcgactttggtgccaacctcgaattcgtctcggatcgttcttccgag
ggtaaccagttcgtcaagggctttggtggtatcggtgccatcctgcgttatgccctcaac
tttgaacagcttgccgaggtcgacgacgatgaagacgagttctacgatgattga
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