Bipolaris oryzae: COCMIDRAFT_9754
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Entry
COCMIDRAFT_9754 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_9754
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
COCMIDRAFT_9754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
DEAD
AAA_34
zf-RING_UBOX
DRAT
Motif
Other DBs
NCBI-GeneID:
19129080
NCBI-ProteinID:
XP_007693129
JGI:
Cocmi1_9754
UniProt:
W6YRV5
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MALRRSTRKSTNSVANDVAPASSPLPGAKIKDSPAMGSRHQQKLTRASRTFVPNSSDQES
DTIEAIVPKESTQTRRVLKAVSIPTSKPQKTPATRSQLSSVNTRQTEQESSTGSPSLDNS
DYETPGTSISTTPAASVDRGKMPARRGRNNTTTPSQSSASISKRSRDMVLDSDSESVVFD
MDAEIALQMQLEDEMGMPRSKRQKTEEEDEDEVMEEDEDDDEISDLDELDSPPPYIGKGK
GKALDIPVKRGRSARSSAKKKSKFTEDDFIDDEESDGGDFQPDEHEDHDDLESLLALEEA
MLPSDSDEEPLKKTAARLRKLAAARPTRAARGTKKQLTHDERIEAHGRRARFAHIADKWE
RKRAMNRERAEQQHPKLRTMWDDLKKVPVLEVQKAEQPQSINRRLKPFQLEGLSWMIRQE
QTHYRGGLLGDEMGMGKTIQAVSLIMSDYPAKQPTLVCVPPVALMQWTNEIREYTDNKLK
VLVYHGTNAKCKKMTVKELKSYDVIMVSYNSLESLHRKETKGWSRGEDIIKEASPLHAIY
YHRLILDEAHSIKSRNTGVAKACFALRSDYKWCLSGTPVQNRIGEFFSLLRFLEVRPFAD
YFCRSCDCEKLHWATNDDHMCVACNHGASEHISVFNQELLNPITGDDPELREEALTKLHL
ITARIMLRRMKRDHTNSMELPMKDIIIHNEFFSEVERDFSTSIMSNSSRKFDTYVAQGVM
LNNYANIFGLIMQMRQVANHPDLLLKKKAGEGAGNVYVCNICDEPAEDAVRSHCRHEFCR
ACIKDFMDTCEASGTEADCPRCHIALSIDFEQPELEQDEDSVKKTSIINRIKMENWTSST
KIEMLVYDLYKLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAQRQKS
IDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQRRPC
VITRLCIEDSVESRMVALQEKKAAMIAGTVNNDKVAMDRLSPEDLQFLFRGT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggcgatccacccgcaagtcaaccaacagcgtcgccaacgatgtcgcccct
gcaagttcgcctcttcctggagctaaaataaaagattccccagcaatgggtagtcgccac
cagcagaaactcactcgcgcttctcgcacctttgttccgaactcctccgatcaagagagc
gatacgattgaagccatcgtgcccaaggaatctacacaaactcgccgggttctcaaggca
gtctcgatccccacttccaaacctcagaagacgcccgccactcgcagtcagctctccagt
gtcaacacccgtcagacagaacaggagagctcgactggctcaccttctctagacaactca
gactatgaaacgccaggaaccagcatatcaactacaccagctgcttcagttgaccgcgga
aagatgcctgctcgccgaggccgcaacaataccaccacgccgtcgcaaagcagcgcatcg
atttcgaaacgatcccgtgacatggtcctagactcggactctgaaagtgttgtattcgat
atggatgcggagattgctctacaaatgcagcttgaggatgaaatgggtatgccgcgaagc
aagcgtcagaagaccgaagaagaggatgaagacgaggttatggaagaagatgaagacgac
gatgagatatcagacttggatgagctggactcgccacctccctatatcggcaaaggaaaa
ggcaaggctctggatattccggtcaagcgtggtcgctctgcccgctcaagtgcgaagaag
aagagcaaattcacagaggatgatttcatcgatgacgaagaatccgatggcggtgatttc
caacctgacgagcatgaagaccatgatgaccttgagtccttgctcgctcttgaggaggcg
atgctcccaagcgacagcgatgaggagccactaaagaaaaccgctgcacgcctgagaaag
cttgctgcggcgagaccaaccagggcagctcgaggcacgaagaagcagttgacccacgat
gaaaggattgaagcacatggacgacgggctaggtttgcgcacattgcggataaatgggag
cggaagcgtgccatgaaccgtgagcgagcagaacagcagcaccccaaactacgcaccatg
tgggatgacttgaagaaggttcctgttcttgaggtccaaaaggcagagcagccgcagtca
atcaacaggcgactaaagccatttcaacttgagggactcagttggatgattcgccaggaa
cagactcactacaggggtggcctactcggagacgagatgggtatgggcaagactatccag
gctgtctccctgataatgtctgactaccccgcgaagcagcccacgcttgtgtgcgttcca
cccgttgctcttatgcagtggacgaatgagatacgcgagtacacagacaacaagctcaag
gttcttgtgtatcacggcacgaacgccaagtgcaaaaagatgacagtcaaggagttgaag
tcttacgacgtcatcatggtctcctacaattctttggaatcgctgcatcgcaaagagaca
aaaggatggtcccgtggagaagatatcatcaaggaagcgtctccactccatgccatctac
tatcaccgtctcatcctggacgaagcgcacagcattaagtcacgcaacacgggtgtagcc
aaggcttgctttgcattgaggagcgactacaagtggtgcttgtccggtacaccagttcag
aaccgtatcggagagttcttttcactccttcgtttcttggaggttcgtccctttgcagat
tacttctgtcgttcgtgtgattgcgagaagctccactgggctacgaatgacgaccacatg
tgtgtcgcctgtaaccatggagcgtccgagcatatctctgttttcaaccaagagttgctc
aatcctatcactggcgatgatcccgagcttcgagaagaggccttgaccaagcttcacctc
atcactgcccgtatcatgttgcgacgcatgaaacgcgaccacaccaactctatggagctt
cctatgaaggatatcatcattcacaacgagttcttcagtgaggtggagcgtgacttctcg
acctcgatcatgtcgaactcttcgcgcaagttcgatacgtatgtcgcacagggtgttatg
ctcaacaattacgccaacatcttcggtctgattatgcagatgcgtcaagtcgccaatcat
cctgatctgctgcttaagaagaaggcaggtgaaggtgctggtaatgtctatgtctgcaat
atctgtgatgagccggctgaggatgctgttcgctctcactgccgccacgagttctgtcgt
gcttgtatcaaggacttcatggacacttgcgaggcctcaggaaccgaggctgactgccct
cggtgtcatatcgccttgtccatcgactttgagcagcccgagctcgaacaagatgaggat
tctgtaaagaaaacatcgattatcaaccgcatcaaaatggagaactggacttcttctacc
aagattgagatgttggtgtacgatctgtacaagctccgaagcaagaagcagacgctcaaa
tcgatcgtcttcagccagtttacttccatgttgcaactgattgagtggcgtcttcgtcgc
gctggtttcaacacagtcatgttggatggtagcatgacgcctgcacagcgacagaagagc
attgaccattttatgacgaacccagatgttgaggttttcctggtgtctctgaaggctggc
ggtgttgccctcaatttgaccgaggcttccagggtgttcatcgttgacccgtggtggaac
cccgctgccgagtggcagtctgcggatcgttgtcatcgcattggtcagcgtcgtccctgt
gtcattacacgtctttgcatcgaggacagtgtggagtcgcgtatggttgcactgcaggag
aagaaggcggccatgattgctggaacggtcaacaatgacaaggttgccatggatcgcctc
agtcctgaggatttgcagttcttgttccgtggtacctaa
DBGET
integrated database retrieval system
