Bradyrhizobium ottawaense: CIT37_11320
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Entry
CIT37_11320 CDS
T05524
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT37_11320 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bot03400
]
CIT37_11320 (xth)
Enzymes [BR:
bot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CIT37_11320 (xth)
DNA repair and recombination proteins [BR:
bot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CIT37_11320 (xth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWL92737
UniProt:
A0A2U8P503
LinkDB
All DBs
Position
complement(254144..254959)
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AA seq
271 aa
AA seq
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MRFSLTTWNINSVRLRIDLVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN
GQKGYHGVAIVSKIPFESTDIRTFCDKLDSRHISVSFGEKASIAKPLVVHNFYVPAGGDI
PDPALNEKFDHKLRFLDEMKACEPLHPRGEDRHILVGDLNVAPHENDVWSHKQLLKVVSH
TPIETEKLQAALAAGEWVDVARERIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRAL
KDAVSDFRILRDARSWERPSDHVPVTVTLEV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttccctgacaacctggaacatcaattcggtgcggctgcgcatcgatctggtc
gcgaaattcctcaagagcgcgcggccggacgtgctgtgcctgcaggagaccaagtgcatc
gacgatgcctttccgctgaagcgcttcaagcggctcggctacgagcacgtcgcgctgaat
gggcagaagggctatcacggcgtcgccatcgtctcgaagattccgttcgaatcgactgat
atccgcaccttctgcgacaagctggattcgcgtcacatctccgtatcgttcggcgagaag
gccagtatcgcaaagccgctggtggtgcataatttctatgtccccgccggcggcgacatt
cccgatcccgcgctgaacgagaagttcgaccacaagcttcgcttcctcgacgagatgaag
gcgtgcgagccgctgcatccgcgcggcgaggatcgccacatcctggtcggcgatctcaac
gtcgccccacacgagaacgacgtgtggtcgcacaagcagcttctgaaggtggtctcgcac
acgccgatcgaaaccgaaaagctgcaggccgcgctggccgccggcgaatgggtcgacgtc
gcacgcgagcggattccgatgtcggaaaaagtctatacgtggtggagctaccgctccgcc
gactggaccgtcggcgaccgcggccgccggctcgatcacatctgggtctcgcgcgcgttg
aaggatgcggtcagcgatttcaggattctgcgcgatgcgcggagctgggagcggccgtcg
gaccacgtgcctgtcacggtgacgctggaggtgtag
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