Brevibacillus parabrevis: PSE45_01355
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Entry
PSE45_01355 CDS
T08846
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSE45_01355 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpab03021
]
PSE45_01355 (rpoB)
03400 DNA repair and recombination proteins [BR:
bpab03400
]
PSE45_01355 (rpoB)
Enzymes [BR:
bpab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSE45_01355 (rpoB)
Transcription machinery [BR:
bpab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSE45_01355 (rpoB)
DNA repair and recombination proteins [BR:
bpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSE45_01355 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WDV95661
LinkDB
All DBs
Position
231218..234757
Genome browser
AA seq
1179 aa
AA seq
DB search
MAGKVIQSGRHRQRRTYSRINEVLGLPNLIEIQQKSYQWFLDEGLREMFQDISPIQDFTG
NLVLEFIDYSLGEPKYDVDESKERDVTYAAPLRVKVRLLNKETGEVKEQEVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYNTKVDKNGKQTFTATVIPNRGAWLELETDAKDVI
YVRIDRTRKIPVTVLLRALGFGSDIEILNLLGEDEYIKNTLEKDNTDSTEKALIEIYERL
RPGEPPTVENAKSLLISRFFDPKRYDLASVGRYKMNKKLHLKNRLYNQRLAETLVDTKTG
EIFAEAGQMIDRRVLDRIVPALETNIGFLDVRTHGGVLEEETIHLQSINIFSPIEDGKII
KVIGNGNVDKSFKHITPADIVSAINYFMNLLHGVGSTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDQNQITPQALINIRPVIASLKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSSFARINDYG
FIETPRRKVDPETGFVLRDIVYLTADEEDVFNVAQANQPLDDDGRFVNDMVICRRKGEIL
SVPRDKVDFMDVSPKQVVSVATALIPFLENDDANRALMGSNMQRQAVPLLIPQAPFVGTG
MEHKAAQDSGVAIVAKHPGQVERVTAREIWIRRYKEIDGKKVAGDIDKYKMHKFIRSNQG
TCINQRPIVSRGDWIEKGDIIGDGPSTEKGELALGRNVIVAFMTWEGYNYEDAILLSEKL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERGIIRVGAEIQDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGSGIIVDVKVFTRENGDEL
PPGVNQLVRVYIAQKRKISVGDKMAGRHGNKGVIARIMPEEDMPFLPDGSPVEIVLNPLG
VPSRMNIGQVLETHLGMAAKLLGIHVATPVFDGARQAEVFETLEEAGLDRDGKTILYDGR
TGEPFDRRVTVGCVYMLKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEQEIEMREMEDEDEGNGEKLNLVLEGGSLNDE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtaaagtgattcaaagtggccgacaccgccagcgtcgtacgtattcacgtatt
aacgaagtgctgggccttccaaatctcatcgagattcagcaaaagtcctaccaatggttc
cttgatgaggggctccgtgagatgttccaagacatttcgccaatccaggacttcactggc
aatctcgtgctggagtttatcgactacagcttgggagagccaaagtacgatgttgacgag
tcgaaagaacgtgacgtcacctatgcggcgcctctgcgtgtgaaggtacgtttgttgaac
aaagagacgggagaagtgaaggaacaagaagtcttcatgggggatttcccgctcatgacc
gaaacgggaaccttcattattaatggtgctgagcgcgtaatcgtcagccagcttgttcgt
tcccccagtgtatattacaacaccaaagtggacaaaaacggcaagcagacgtttacagct
acggtaatcccgaaccggggtgcgtggctggagctggagaccgatgcgaaagacgtaatt
tatgtccgcatcgaccgtacgcgaaaaatcccggtaacggttcttttgcgtgcactgggc
ttcggttccgacatcgagattctcaacttgctgggtgaagatgagtacatcaagaacacg
ctggaaaaagacaacaccgactctacggaaaaagcgctgatcgagatttacgagcgcctt
cgtccgggtgagccgccaacagtcgaaaacgcgaagagcctcttgatctctcgtttcttc
gatccaaaacgttacgacctggcttctgtaggtcgctacaagatgaacaaaaagcttcat
ctgaaaaaccgtctgtacaaccaacgcttggctgaaacattggtcgataccaaaaccggc
gaaatttttgccgaggcgggacaaatgattgaccgccgcgtactggatcgcattgtgcct
gcgttggaaaccaacattggtttccttgatgttcgtacgcatggcggcgttttggaagaa
gagacgattcatctgcaatccattaatattttctctccgattgaagatggcaagatcatc
aaagtcatcggaaacggaaatgtggataaatccttcaagcatattacgccggcggatatc
gtttcggcgatcaactatttcatgaacctgcttcatggcgttggttccactgacgatatt
gaccacttgggcaaccgtcgtctccgttccgtgggtgagcttttgcagaaccagttccgt
atcggtttgtcccgtatggagcgcgtggttcgcgagcgtatgtccattcaggatcagaac
caaatcacgccgcaggctctgattaacatccgtcctgttattgcgtcgctgaaagagttc
ttcggaagctcccagctgtctcagtttatggaccaaacaaacccattggctgagctgacg
cacaaacgccgtctgtccgctctcggacctggtggtttgacgcgtgagcgcgcgggcttt
gaagtgcgcgacgttcaccactctcactacggccgtatgtgtccaattgagacgccagag
ggaccaaacatcggtttgatcaactccctgtcgtcctttgcgcgcattaacgactacggc
ttcattgaaacgccacgccgcaaggtagacccggaaacaggctttgtgttgagggacatc
gtctatctgactgcggatgaagaggatgttttcaacgtggcgcaggcgaaccagcctctc
gatgatgatggacgctttgtgaacgacatggttatctgccgtcgcaaaggcgagatcttg
agcgtgcctcgcgacaaggtagacttcatggacgtatcgcctaagcaagttgtatccgtt
gcgacggcgctcattccgttccttgagaacgatgacgcgaaccgcgcgctgatgggttca
aacatgcagcggcaggccgttccgcttttgattccacaagcaccgttcgtcggtacgggt
atggagcacaaagcagcgcaagactccggtgtggcgatcgttgccaagcatccgggtcaa
gttgagcgtgtaacggctcgcgaaatctggattcgccgctataaagaaatcgacggcaag
aaagttgctggcgatatcgacaaatacaaaatgcacaagttcatccgttccaaccaagga
acctgcatcaaccagcgtccgatcgtaagccgcggagactggattgaaaaaggcgacatc
attggtgacggtccttccaccgaaaaaggtgaattggcattgggtcgtaacgtaatcgtc
gcgtttatgacgtgggaaggttacaactacgaggatgcgattctcctgagtgagaagctt
gtgaaggatgacgtttatacgtcgatccatattgaagaatacgagtccgaagctcgcgac
accaagctgggcccagaagagatcacccgcgatattcctaacgtcggggaagacgctctg
aaaaacctggatgagcgcggtattatccgcgtcggcgctgagattcaagacggcgacatt
ctcgttggtaaagtaacgccaaaaggggttaccgagctgactgcggaagaacgcctcttg
cacgccattttcggggaaaaagcccgtgaagttcgcgatacatccctgcgcgtaccgcat
ggtggttccggtattatcgtagacgtgaaagtatttacgcgtgagaacggcgacgagctg
cctccaggcgtgaatcaactggttcgtgtctacatcgcccaaaaacggaaaatctccgtg
ggtgacaagatggccggacgacatggtaacaaaggggttattgcccggatcatgccagaa
gaggatatgccattcctcccagacggctctcctgttgaaatcgtactgaacccgttgggc
gtaccttcccgtatgaacatcggtcaggtattggagactcacttgggtatggcagcgaag
cttctcggcatccatgtggcgacacctgtattcgacggtgcccgtcaggcagaagtattc
gagactttggaagaggctggcctcgaccgtgatggtaaaaccatcttgtacgatggacgt
acaggtgaaccgttcgatcgtcgtgtaacggtcggatgcgtatacatgctgaaactggct
cacttggtagatgacaagattcacgcccgttctaccggtccatactctctcgttactcaa
cagccattgggtggtaaagctcaattcggcggacagcgtttcggggagatggaggtttgg
gcattggaagcttacggtgcagcctacaccttgcaggaaattctcaccgtcaagtcggat
gacgtcgtgggtcgcgtgaagacgtacgaagcgattgtcaaaggtgaaaacgtgccagag
ccaggtgttcctgaatcgttcaaggttctgatcaaggaactgcaaagcttgggtatggac
gtgaaaatcctgtccggcgacgagcaggagattgaaatgcgtgaaatggaagatgaggat
gaaggcaacggtgaaaaactgaacctcgttctcgaaggtggaagcttgaacgacgagtaa
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