Brevibacillus parabrevis: PSE45_26810
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Entry
PSE45_26810 CDS
T08846
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSE45_26810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpab03019
]
PSE45_26810
03009 Ribosome biogenesis [BR:
bpab03009
]
PSE45_26810
Enzymes [BR:
bpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSE45_26810
Messenger RNA biogenesis [BR:
bpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSE45_26810
Ribosome biogenesis [BR:
bpab03009
]
Prokaryotic type
rRNA helicases
PSE45_26810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF1722
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WDV95202
LinkDB
All DBs
Position
complement(5745299..5747209)
Genome browser
AA seq
636 aa
AA seq
DB search
MEMAKLTDFFRLGIRKEWIDALQANGITEPTPIQEKAIPALLAGKDVISQAQTGTGKTLA
FVLPILEKADPDSNDVQALVLTPTRELALQITAEVKKLTAATDDLHVLAVYGGQDVDRQL
RKLAGKKQVVIATPGRLLDHMRRGTIDLSTVSMFVLDEADQMLHMGFLPEVEDIAASLPD
KRQTMLFSATMTPQVRALAQRFMQNPEDIRVQGKRITLANIRQIAVETTDRAKQSALRTL
IDEERPFLAVIFCRTKRRASTLNAALQGFGYLSDELHGDLSQAKREDVMKRFREARIQLL
VATDVAARGLDVEGVTHVFNYDIPEDVDSYIHRIGRTGRAKEKGIAYTMVAAKDRAQLAE
IEKGIAMTLERRASEQAADYGENEEHMQHKTKHKGQERAGRGGQRGGKPARTEGEHRGSK
PARTEGEHRGSKPARAEGEHRGSRPARAEGEHRGSKPARAEGEHRGGKPARAEGGQRGGK
PARAEGEHRAGRPVRAEGEHRAGRPARAEGGQRGGKPPKAEGKQQAGKGKRETGKRGQHG
ADRQQQTARLTPKNGDDQRTQERMTKTGQSSERAAGRSDFAGKSANASRKPGAFSHKRAE
KQHGGSARFDGQKQTGKRPSPAPAKRGSTARRTKKR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
ttggagatggcgaaactgacggatttttttagattgggcatacgaaaagaatggatagat
gcgctgcaagcaaatggaattacagagccgaccccgatccaggaaaaagcgattcctgcg
ctgttggcaggcaaggatgtgatttcccaggcgcagacaggaacggggaagacgcttgct
tttgtcctgccgattttggagaaagcggacccggactcaaacgatgtgcaggcgctggtg
ctcacacctacccgcgagctggctctgcaaattacggcagaggtgaaaaagctgacggct
gccacagatgatctgcacgtgctggccgtatatggcggacaagacgtcgaccggcaactg
cgcaagctggcgggcaaaaagcaggtggtgatcgctactcccggcagattgctggatcac
atgagacgaggaacgatcgatttgtcgaccgtctccatgtttgttctcgatgaggcagac
cagatgctgcatatgggctttttgccagaggtggaagacatcgcggcgagcctgcctgac
aagcggcagacgatgctgttttccgcgacgatgacgccgcaggtgcgcgcactggcgcag
cgcttcatgcaaaatccggaagatatccgggtgcaaggcaaacggattacactggcgaat
atccggcaaatcgccgtggaaacgacggatcgtgcgaagcagtctgccttgcgtaccttg
attgatgaagaacgcccgtttttggcagtcatcttttgtcgcacgaaacgccgggcgagc
acgttgaatgccgccctgcaaggctttggctatttgtcggacgagctgcacggcgatttg
tcgcaggcaaaacgcgaggatgtaatgaagcgttttcgggaggcgagaatccagctactg
gtggcaaccgatgtagcagcgcgcgggcttgacgtcgagggagtcactcacgtgttcaat
tacgacatcccggaagatgtcgacagctacattcaccggatcggcagaacgggccgggcc
aaggaaaagggcatcgcttatacgatggtggcggccaaggatcgggcacagctcgcagag
attgaaaaaggaatcgccatgactttggagcggcgtgcgagcgagcaggcggcggattac
ggggagaacgaggagcatatgcagcacaagacaaagcataaggggcaggagcgcgcaggc
agaggcggtcagcgtggaggcaagccagccagaacagaaggcgagcaccgtgggagcaag
ccagccagaacagaaggcgagcaccgtgggagcaagccagccagagcagaaggcgagcac
cgtggaagcaggccagccagagcagaaggcgagcaccgtgggagcaagccagccagagca
gaaggcgagcaccgtggaggtaagccagccagagcagaaggcggtcagcgtggaggtaag
ccagccagagcagaaggcgagcaccgtgcgggcaggccagtcagagcagaaggcgagcac
cgtgcgggcaggccagccagagctgagggcggtcaacgtgggggcaaaccacctaaagcc
gagggtaagcaacaggccgggaaagggaagcgcgagacgggaaaacgcgggcagcacgga
gccgatcgccagcagcaaaccgctcgcttgacccccaaaaatggggatgaccagcgaacc
caggaacggatgacgaaaacagggcagagcagcgagcgagcggcaggcagaagcgatttt
gcgggcaaatccgcaaatgcttcgcgcaagccgggggctttttcccataagcgagcagag
aagcagcatggtggcagcgctcgttttgatggccaaaaacagacaggcaaacggccaagt
ccggcgccagcaaaacgcggcagcaccgctcgaaggaccaagaagcgctga
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