Bombus pascuorum (common carder bee): 132905765
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Entry
132905765 CDS
T09597
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bpas04040
]
132905765
Ion channels [BR:
bpas04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132905765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
132905765
NCBI-ProteinID:
XP_060813329
LinkDB
All DBs
Position
4:6668619..6737996
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AA seq
2062 aa
AA seq
DB search
MSEDSDSVSEEERSLFRPFTRESLAAIEARIAEEHAKQKELEKKRAEGEGGFGRKKKKKE
VRYDDEDEDEGPQPDQMLEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQRTFVVISKG
KDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPEDGSWGNLTDENWERFVSNETNWYVDEAKNMPLCGNSSGAGQCLPGYTCLQGYGE
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAALAKENKLAAQAAAREAAAVAAVAAA
DQIVKSPSDFSCHSYELFVGQEKGNDDNNKERMSIRSIESVSEHRVKQINNHTATTKPRK
VSAVSRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRFVGPPGGD
RKPLVLSTFLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSY
TSHGDLIGGIANAGKPMTKESQLRIRSVRPPSVNGHFTDSNQKYHYEGDLEDPMGKAKQQ
DNPFIEPSQQHAVVDMKDVMVLNDIIEQAAGRQSRTPEQGVSTYYFPTDDDEEGPKFKDK
LLAAVLRCIDIFCVWDCCWLWLEFQKYVSLVVFDPFVELFITLCIVVNTLFMALDHHDMD
KDMEKVLKTGNYFFTATFGIEATLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQ
GLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFG
KNYTDNVDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLAT
VVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKRNVLYLAK
MMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAYRDKKSAKEINQLEVAI
GDGMEFTIHGDLKNKLKKGKLCMNNSKVIANSINHRDYRLDNDYINQNEDDTISNKSYGS
HKNRAFKDESHKGSMDSLDGEEKKDASKEDLEQEEDLGEEGEEGEGVLGDAIIQADEDPI
ESDYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFQLIENKYFETAVILMILLSS
MALALEDVHLQQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKKYFTNAWCWLDFIIV
MVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL
VCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSHEIIPDRNACLAENYTWENSPMNFDHV
GKAYLCLFQVATFKGWIQIMNDAIDSRELNKQPIRETNIYMYFYFVFFIIFGSFFTLNLF
IGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEI
VTDKKFDMIIMLFIGLNMLTMTLDHYQQTQTFSDVLDYLNMIFIVIFTSECLMKIFALRY
HYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIR
TLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMILL
FQMSTSAGWDGVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVINMY
IAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSDFLDVLEPPLQI
HKPNKYKIVSMDIPICKGDMMFCVDILDALTKDFFARKGNPIEESAEIEVQTRPGEAGYE
PVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDADTDPRVRQTAVLVESDGFVT
KNGHRVVIHSRSPSVTSRTADV
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctgtatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgaggctcgcatcgccgaggaacatgccaagcagaaggag
ctcgagaagaagagagcggaaggcgagggaggttttggacggaagaaaaagaaaaaagaa
gttcggtatgacgacgaggacgaggacgagggtcctcagccggatcagatgctcgagcaa
ggagcaccgattccggtccgactgcacaacgaatttccacccgagttggcctccacacct
ctcgaggatatcgatagcttctatcataaccaaaggaccttcgtcgtcatcagcaaggga
aaggacatattcaggttctcagcgacagatgcgatgtggatcctcgacccgttcaaccca
atacgacgtgtggccatttacatattggttcacccactgttctccctcttcattatcact
acaatattggttaactgcatactcatgatcatgcccactacgcccaccatcgagtctacg
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggaca
tttcgagtcctccgagccttgaagactgtcgctattgtaccaggtctgaaaaccattgtc
ggcgctgtgatagaatccgtgaagaacctgcgcgatgtgataatcctgacgatgttctct
ctttccgtctttgcgctgatgggcctccagatttacatgggggtgctcacgcaaaagtgt
ataaagaactttcccgaggacggctcctggggcaatctcaccgatgaaaactgggagcga
ttcgttagcaatgaaactaattggtacgtggacgaggcgaaaaacatgcctttgtgtgga
aattcatctggagcagggcagtgccttcctggctacacgtgtttacaaggatacggtgaa
aatccgaattatggttacacgagtttcgacacctttggctgggctctactctccgctttt
cgtttgatgacgcaagattattgggaaaatctgtatcaactggtgcttagatcggccggt
ccatggcatatgttgttctttatcgtgatcattttcctcggctccttttatctggttaac
ttaatcctcgctattgtcgcgatgtcttatgacgagttgcaaaagaaagctgaagaagag
gaagctgctgaggaagaagccataagagaagccgaggaagcagctctagcgaaagagaat
aagctggcggcgcaggcggcggctcgggaggcggcagccgttgcggcggtggccgccgcc
gatcagatcgtcaaatcaccgtcagacttctcatgtcatagctatgaactgtttgttggt
caggaaaaagggaacgacgataacaacaaggagaggatgagcatacgttcgatcgagtca
gtcagcgagcatagagtgaaacagatcaacaatcacacggccaccactaaaccacgaaaa
gtcagcgctgtctctcgcgccgctaatggccagtttacttatgcctaccaggaaagcctg
cggaaggcgagtcttagtctgcctggttcaccgttcaatctccgtcgaagcagccgcggt
agccatcagttcacgatcagaaatggccggggccgtttcgtcggaccgccaggaggcgac
cggaagccgttggtcctgtcgacgttcctcgacgcccaggaacacctgccatacgcggac
gactcgaacgcggtcacgccaatgtccgaggagaatggcacgatcgtcgtgcctgtctac
tacgcgaatcttgggtccaggcactcgtcgtacacgtcgcacgcatcacggctttcgtac
acgtcccatggtgatttgatcggtggaatagcaaacgcggggaaaccgatgacgaaggag
agccagctgagaatcagatctgtcaggccaccatccgtgaatggccatttcacggattct
aatcagaagtaccattacgagggtgatctagaagatcctatgggcaaggcaaagcaacaa
gacaatccgtttatagagccttcgcaacaacatgccgtagttgatatgaaagacgtgatg
gtgctgaacgatatcatagaacaggccgcgggtcgacagagcagaacaccggagcaagga
gtttcgacctattactttccgacagacgacgatgaagaagggccaaagtttaaggacaaa
ttgttggccgcggtgctacgttgcatcgatatcttctgcgtgtgggattgttgctggttg
tggcttgagtttcaaaaatacgtgtctcttgtggtgttcgatccattcgtagagttgttc
atcaccctttgtatcgtcgtcaatacattgttcatggcgctcgatcatcacgatatggac
aaggatatggaaaaagtgctcaagacaggaaactacttcttcacggcaacattcggtatc
gaggcaacgctgaaactgatagcaatgagtccgaaatattactttcaagaaggatggaat
attttcgacttcattatcgtcgctctttcgcttctggaattgggattagaaggtgtccaa
ggtctctccgtattgcgatcgttcagattgttaagagtgttcaaactggcgaagtcgtgg
cctacgttgaatctgctaatttccatcatgggcagaacagtaggagcgctgggtaacctg
acgttcgtgttatgtatcatcatcttcattttcgccgtgatgggtatgcaattgtttggg
aagaactatacggacaacgtcgatcggttccccgatggagatctaccgagatggaatttc
accgattttatgcattcgttcatgatcgtgtttcgcgtactctgtggagagtggatcgag
tctatgtgggattgtatgcttgtgggcgacgtctcttgcataccattctttctggctact
gttgtcatcggtaatctggttgtgctgaatctcttcttggctttgttgctgagcaacttc
ggttcgtcgaatctatcggcgccgaccgcggacaacgatacgaacaagatcgcggaggcg
atcgatcgaatagcacgatttattaagtggatcaagcgaaatgtcctttatcttgctaaa
atgatgcgagccaaactcaccaatcagatatccgatcaggcgccaggtgagggaccgtcc
aacagttggaaagaagatggaattgatcgcgatggggacctagatcttgcagatggagag
ctggatgcgtatagagataaaaagagtgccaaggagataaaccaactcgaagttgctatc
ggagatggaatggaatttaccatccatggagatctaaagaataaattgaagaagggtaaa
ctgtgcatgaacaacagcaaagttatagcaaattcgataaaccatcgtgactacaggctg
gacaacgattatattaatcagaacgaggatgataccatcagtaataaatcatatggcagc
cacaagaatagagcgttcaaggacgaaagtcataagggaagtatggactcgttggatggt
gaagaaaagaaggatgcgagtaaagaagacctggaacaagaagaagatcttggagaagag
ggagaggagggagaaggcgtcctaggagatgcaattatccaagcagacgaagatcccatc
gaatccgactatccggctgactgttgtccagaaaattgttacaagaaattcccgttctta
gctggtgacgatgacgctccattttggcaaggttgggccaacttgagactgaagaccttc
caactaattgagaacaagtattttgagactgccgtcattttgatgatccttttgagtagt
atggctctcgccttggaagatgtgcatcttcaacaacgacccattctgcaagatatctta
tactacatggaccgaatatttactgtgattttcttcctcgaaatgttaatcaaatggttg
gctctcggcttcaaaaagtacttcacgaacgcttggtgctggcttgatttcatcattgtc
atggtgtcactcattaacttcgtagcgtcgctctgtggcgctggcgggatccaagccttc
aaaacaatgaggaccctaagggccctaaggccactcagggcgatgtctagaatgcaggga
atgcgggtagtcgtcaacgctttggttcaagccattccatccattttcaacgtgttactg
gtgtgtcttatcttctggttgatcttcgccattatgggtgtacagctttttgccggcaaa
tatttcaagtgcgtagatgccaataaaacaacactcagccacgaaataatccctgaccga
aatgcctgtttggctgagaactatacctgggagaattctccgatgaatttcgaccacgta
ggaaaggcttatctgtgcttgttccaagtggccacgtttaaaggatggattcagatcatg
aatgacgcgatagattctagggagctcaacaaacaaccaattcgtgaaacaaacatctac
atgtatttctattttgtattcttcattatattcggatcgttttttacccttaatctattc
attggtgtgatcatcgataacttcaacgagcagaagaaaaaggcgggtggttccctcgag
atgttcatgacggaagaccagaagaaatattacaacgctatgaaaaagatgggtagcaag
aaaccattgaaagccattccacgtccaagatggaggccgcaggcgatagtgtttgaaata
gtgacggacaaaaagttcgatatgataatcatgttgttcatcggactgaatatgcttacg
atgacgttggaccactatcaacaaactcagactttcagcgatgttctggactatctaaac
atgatattcattgtgatattcaccagcgagtgtctcatgaagatcttcgctctgcgttac
cactatttcaaggagccatggaacctctttgattttgttgttgttatattgtcaatatta
ggtctggttctcagcgatattattgagaaatatttcgtatcgccgaccttgctccgtgta
gtaagggtggcaaaagtcggtcgtgtgcttcgactcgtaaaaggtgctaagggtattcga
actcttctcttcgccctggcgatgtcgttaccagctctcttcaatatttgcctattactg
tttttggtgatgtttatcttcgcgatttttggaatgtcattcttcatgcacgtgaaagac
aagagcggactggatgatgtatacaatttcaaaacgttcggccagtcgatgatattgcta
ttccagatgtcaacgtctgccggttgggatggcgtcctcgacggtataataaacgaggag
gactgccaggaaccgaacaacgagataggatatccgggcaactgtggttcgtccacgatc
ggcatcgcctatcttctctcgtacctggtgatcagcttcttgatcgtgataaacatgtac
atcgccgtgatcttggagaattactcccaagctaccgaggatgtgcaggagggtctgacg
gatgacgactacgacatgtactacgagatctggcaacagttcgacccagatggaacgcag
tacatcagatacgatcagctgtccgatttcttggacgtgctggagccgccgttacagata
cacaagccaaacaagtataagatcgtatctatggacatcccgatatgcaagggagatatg
atgttctgcgtagacattctggatgctctcacgaaagacttcttcgcgcgcaagggtaat
ccgatcgaggagtcggcagagatcgaggttcagacgcgtccaggtgaggctggttacgaa
ccagtttcctcgactctgtggcgtcagcgtgaggagtattgcgcgcgtctgattcagaac
gcctggagaaagcacaagcaacaacgtctaggcggaccaagcgaagaaagcgacgacgct
gacaccgatccacgggtcagacagaccgcggtcttggtcgagagtgacggtttcgtgacg
aaaaatggccacagagtcgtcatacatagccgatcgccgagcgtaacctcgagaaccgcg
gacgtctga
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