Butyrivibrio proteoclasticus: bpr_I1286
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Entry
bpr_I1286 CDS
T01292
Name
(GenBank) RNA helicase DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bpr_I1286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpb03019
]
bpr_I1286
03009 Ribosome biogenesis [BR:
bpb03009
]
bpr_I1286
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bpr_I1286
Messenger RNA biogenesis [BR:
bpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bpr_I1286
Ribosome biogenesis [BR:
bpb03009
]
Prokaryotic type
rRNA helicases
bpr_I1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
FAM110_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADL34024
UniProt:
E0S2Q7
LinkDB
All DBs
Position
1:1597988..1600123
Genome browser
AA seq
711 aa
AA seq
DB search
MQLQKPHISRLVVIVIVLRNKESFMNKDLEKELLDQAEVQEENIKEPEKKTKKEDEDKVR
YDESGLDERIIRAVSEMGFEYMSPIQKAAIPVMIQGKDIIGQAQTGTGKTAAFGIPLLHQ
VDPANKHLQAVVLCPTRELAMQAADDIRDFAKYMFGIKVLAVYGGQDISRQIKALSNGVQ
IVVGTPGRVMDHMRRHTMKMKDVKVLVLDEADEMLDMGFREDIETILQGMPMERQTALFS
ATMPEAILKITKTYQKSDAEYIKMTPKEITVAAIEQAYYRVPQKLKEDVLVRLMDYYNPA
RSLIFCNTKRMVDQLAESLKGKGYLADGLHGDLSQNQRDTVMNLFRNGRINILIATDVAA
RGIDVSGVEAVFNYDIPEDIEYYVHRIGRTGRAGRSGMSFTLVGGREMYKLREIEKVCHT
KIEERHVPKAKEITRVKSQKVFAEVIDIIENGDISSVLEFVNQKVEEGEYTAEQLAAGFM
KLKMGADLEDLVLFEKSDRNRRDFKTRGERGRGERGRDGRRSDRDRDGKRGRGDRERDGK
KSGRDSRSRDGKSYDKDSRGRRGKSFDKEKDLFPKPRRKNKPLNDHDGFNKNTGLDENLI
ASIKADRDQNANKSSDASKTSDNKKYERKPRKSNDGFENVGRINIKGEGSTKSWYMEDTP
RHKKADKQDVDTMNVSKSDKKAIKSENKKRSLDYLADVSSLVMESFGKRKK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacttcaaaagcctcatatatcgaggcttgtagtaattgttatagttttaagaaat
aaagagagttttatgaataaagatttagaaaaagaattattagatcaggcagaagttcag
gaagaaaatatcaaagagcctgagaaaaaaacaaagaaagaggacgaagataaggttcgt
tacgacgaatcaggactggatgagagaattataagagctgtttctgagatgggatttgag
tatatgtctccaattcagaaggcagctattcctgtaatgatacagggaaaagatataata
ggacaggcacagactggtacaggtaagacagctgcatttggtattccgcttcttcatcag
gtggatccggccaataagcatcttcaggccgttgtcctttgtcctacaagagagcttgct
atgcaggctgccgatgacataagagattttgctaaatacatgtttgggatcaaagttctt
gccgtatatggtggacaggatatttccagacagatcaaagctctttcaaatggcgtgcag
atagttgttggtactcccggaagagttatggatcatatgcgcagacatactatgaagatg
aaagacgtcaaggtcctcgttcttgatgaagcggatgagatgcttgatatgggatttaga
gaggatattgagactatcctccagggaatgccaatggagcgtcagacagctcttttctct
gcaacaatgcctgaggcgattctcaagattaccaagacatatcagaagagtgatgctgaa
tatatcaagatgactcctaaggaaataacagtagccgctattgaacaggcttactataga
gtacctcagaagctcaaggaagatgtccttgtaagacttatggattattataatcctgca
agatcacttattttctgtaataccaagagaatggtagatcagcttgctgagagccttaag
ggaaagggctatttagctgatggccttcatggggatctttctcagaatcagagagatact
gtaatgaatctctttagaaacggcaggatcaatattctcattgctactgacgtggcagcc
agaggtatagatgtaagcggcgtagaagcagtgtttaactatgatattcctgaagatatt
gagtactatgttcacaggatcggacgtaccggaagagccggcagaagcggcatgagcttt
acacttgttggcggacgtgagatgtacaaacttagagaaatcgagaaggtttgccatacc
aagattgaagagaggcacgttcctaaggccaaagagattacaagagttaagtctcagaag
gtctttgcagaagtaatagatattattgagaatggtgatatttcttctgttcttgaattt
gttaatcagaaggttgaagagggcgaatatacagcagagcagcttgcagccggttttatg
aaactcaagatgggtgctgatcttgaagatcttgttctatttgaaaagagtgacaggaac
cgtagagactttaagacccgtggtgaaagaggacgtggcgagagaggccgagacggtaga
cgttctgacagagaccgtgacggtaaaagaggtcgtggcgatagagaacgcgatggcaaa
aagtccggaagagattctcgtagccgtgatgggaaaagctatgataaagattcacgtggc
agacgaggcaagtcttttgataaagaaaaagacttattccctaagccacgtaggaagaat
aaaccattaaacgatcatgatggttttaataagaatacaggtcttgatgagaaccttatt
gcgagcataaaggctgacagagatcaaaatgccaataagtcttctgatgcatccaagact
tctgataataagaagtatgagagaaagccaagaaagagtaacgacggatttgaaaatgta
ggacgcattaatatcaaaggggaaggttctacgaagtcatggtatatggaggatactcca
agacataagaaagctgacaagcaggatgttgataccatgaatgtttcaaagtctgacaag
aaggctattaaatcagagaataaaaagagaagccttgattacctggcagatgtaagcagc
cttgtaatggagagctttggtaaacgcaagaaataa
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