Butyrivibrio proteoclasticus: bpr_III062
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Entry
bpr_III062 CDS
T01292
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03420
Nucleotide excision repair
bpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bpr_III062
03430 Mismatch repair
bpr_III062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_III062
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpr_III062
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bpr_III062
MMR (mismatch excision repair)
Other MMR factors
bpr_III062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ADL35751
UniProt:
E0S2W9
LinkDB
All DBs
Position
2:82949..85105
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AA seq
718 aa
AA seq
DB search
MELLEQLNHAQKEAVISTEGYIRVIAGAGSGKTRALSTRFAYLVNGLGIMPGHILCVTFT
NKSANEMRQRIHALTGDNDTGYINTFHGFCVSVLQEDSHAVQYPKNFLVLDNSDIDDMLK
IIYEERGLSLRDMTFSSARDMFEIRKLFEEPEYYLDMLTMPLETLKDKYDQATEVKDILF
YGYLYQEKKCFGLDYNDLIKFTLYIFRENPDIKLKWQKRLEYIMIDEFQDIDSLQYELME
VLAGYHKNLFIVGDPDQTIYTWRGANVKYLLDFDQNFPSVKTIMMNDNYRSTPQILYAVN
SLIDKNRYRIKKDLLPTIAEGESVLCHLAPNTTEEADWITGEILVLKGLGVQYKDITILY
RAHYVTRTIEEGLMKEKIPYTIYSGVQFFGRTEIKDALCYLRMLVYRDDISFRRIANVPK
RNLGKRRMSFLEQYAADNKCSLYAALHENLDNELFKGTKAGKFIDLIEHFAASYEGLPVS
EVLAKILNNSGYEEMLRTEGAQDRLDNLAELKQSVFEYETTCGEEVGLEDYLKHIALFTN
ADSDAGDQDKVRLMTVHAAKGLEFPYVFLCGMNEGIFPSRKVRTLEGMEEERRLAFVAMT
RAQKRLFITEAGGNTFEGIPRYPSRFIMDIDPELLEFTEKPDDNMIKAVRKFIDNDSRHL
KGAEKLNLLEKGQRVKHAILGIGTVLDINLDEESYLIKFDEMDTPRQISMKVNLAKED
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaattattagaacagctcaaccatgctcaaaaagaggctgtaattagtacagaagga
tatattcgggtaatagcaggtgctggaagtggcaagaccagagcgctttccacgcgcttt
gcatatcttgttaatggccttggcattatgccggggcatattctgtgcgttacatttacc
aataaatctgccaacgagatgagacagcgaatacatgcacttaccggagacaatgatact
gggtatatcaatacctttcatggattttgtgtatcggttcttcaggaagattctcatgca
gtgcagtatcccaagaattttctggttcttgataattccgatattgatgatatgctcaag
atcatctatgaagagagagggctgtctcttagagatatgacctttagttcagctcgagat
atgtttgagatcaggaagctcttcgaggaacctgagtactatttagatatgcttacaatg
ccgcttgaaacgctcaaggataaatatgatcaagcgacagaagttaaggatatcttgttt
tatggctatctctatcaagagaagaagtgctttggacttgattataacgaccttatcaag
tttactctttatatattcagggagaatccggacatcaagcttaaatggcagaaaaggctt
gaatacattatgatcgacgaatttcaggatattgacagtctgcagtacgagttgatggag
gttttggcaggttatcacaagaacctgtttatagtaggtgatccggatcagactatctat
acatggcgcggagccaatgttaagtatctcttggactttgatcagaactttcctagtgtt
aagactatcatgatgaatgataattacaggtcaactccacagatactttatgctgtcaat
tctcttatagacaagaatcgctataggattaaaaaggatctgttgcctactattgcagaa
ggggagagtgtcctgtgccatcttgcccctaataccacagaagaggctgactggataacc
ggtgaaattcttgttctgaagggtcttggcgttcagtacaaggatattacaattttatat
agagcacattatgttaccagaactatagaggaaggactcatgaaagagaaaattccttac
acgatatattctggagttcagttttttggaaggacagaaatcaaggatgccctgtgttac
cttagaatgctggtttacagggatgatatttcttttcgccgtattgccaatgtccccaag
aggaatcttggtaaaagaaggatgagctttctggaacaatacgctgcagataacaagtgc
tctctgtatgctgctttgcatgaaaatctggataatgagctgtttaaaggcactaaggct
gggaagttcattgacctcatcgagcattttgcagcgagctatgaaggacttcctgtgtct
gaagttctggccaaaatattaaataacagtggttatgaagaaatgctcagaacagaggga
gctcaggacagacttgataatcttgcggagctcaaacagtctgtatttgaatatgaaact
acctgtggagaagaagttggtcttgaagattacctcaagcatattgcgctttttaccaac
gcggattcagatgccggagatcaggacaaagtaagacttatgactgtgcatgcggctaag
ggacttgagtttccttatgtcttcttgtgcggtatgaatgagggtatattcccttccaga
aaagttcgcactttggagggaatggaagaagagagaaggctggcatttgttgctatgaca
agagcccagaagagactctttatcactgaggctggtgggaatacatttgagggaattccc
aggtatccctccagatttatcatggatatagatccggaattgctggaatttaccgagaaa
cctgatgacaatatgatcaaagctgtcaggaaatttatagataatgacagtaggcacctt
aagggcgcagagaagctgaacctattggaaaaggggcagcgtgtaaaacatgctattctg
ggaattgggacagttcttgatataaatttggatgaggagagttatctgatcaaattcgat
gaaatggatactccgagacagatttcaatgaaggttaacctggcaaaagaagactga
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