Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157581
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Entry
110157581 CDS
T05002
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110157581 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110157581 (tnpo1)
03009 Ribosome biogenesis [BR:
bpec03009
]
110157581 (tnpo1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110157581 (tnpo1)
Ribosome biogenesis [BR:
bpec03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110157581 (tnpo1)
Pre-60S particles
110157581 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
TOR1L1_N
Arm
IBN_N
Vac14_Fab1_bd
TPR_IPO5
Cnd1
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
PDS5
Adaptin_N
HEAT_GCN1_C
CEP104-like_TOG
MMS19_C
HEAT_Maestro
Dopey_N
VPS15-like_hel
HEAT_DAAF5
TPR_TTI1_C
FliT
DUF3689
Motif
Other DBs
NCBI-GeneID:
110157581
NCBI-ProteinID:
XP_020777596
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MECEWKPDQQGLQQILQLLKESQSPDTSIQRSVQQRLEQLNQYPDFNNYLIFVLTKLKTE
DEPTRSLSGLILKNNVKAHYQNFPSGVSDFIKNECLQNIGDSSPLIRATVGILITTVASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNILIPKFL
HFFRHSSPKIRSHAIACVNQFIICRTQALMLHIDPFIENLFALAADEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDPDENVALEACEFWLTLAEQPVCKDVLCGHLSQL
TPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQRHEGEIIDDEEDD
EDELDDTISDWNLRKCSAAALDVLANVFREELLVHLLPLLKELLFHSDWIVKESGILVLG
AIAEGCMQGMIPYLPELIPHLIQFLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLM
TELLQRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLLILY
DAIGTLADSVGHHLNKQEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSIATALQSGFL
PYCEPVYQRCVNLVQKTLAQAILHQSQPDQYEPPDKDFMIVALDLLSGLAEGLGGTIEHL
VARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKSCIADFMPILGQNLNPELI
SVCNNATWAIGEISIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVC
PQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVASW
VNPKDDLRDMFYKILHGFKNQVGEENWKRFSDQFPMPLKERLATFYGV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagaccaacaaggacttcagcagattctccagcttctaaag
gagtcacagtctcctgacacgtccatccaaagatccgtccagcaaagattagagcaattg
aatcagtatccagacttcaacaactatttaatatttgtcctgacaaagctcaaaacagaa
gatgaaccaacacgttcactaagtggacttattctgaaaaacaatgtaaaagctcattat
cagaattttcccagtggtgtatctgattttatcaagaatgaatgtcttcaaaacattggt
gactcatctcccctcatccgggctactgtaggtatcctcatcaccactgttgcctctaag
ggtgagctccaaaactggccggaacttcttcccaaactctgcttgcttttggattctgaa
gactataatacatgtgagggagcatttggagccctacagaaaatctgtgaagactctgcc
gagatcctagacagtgatatgcttgatcggccacttaatattttgatcccaaagtttctg
catttcttcaggcacagcagtcctaaaattaggtcccatgctattgcatgtgtaaatcag
ttcattatctgcagaacgcaggctcttatgcttcatattgatcctttcattgagaatctg
tttgcactagcagcagacgaggagccagaggtgaggaaaaatgtttgtagagctcttgta
atgttattagaggttcgccttgaccgacttcttccacacatgcacaacataattgagtac
atgctacaaaggactcaagatccagatgaaaatgtagctttggaagcatgtgaattctgg
ttgactctggcagagcagccagtgtgcaaagatgtactttgtggacacctctctcaactt
actccagtgcttgttaatgggatgaagtactctgagattgacattatcttactcaaggga
gacatcgaggaagatgaggcaatacctgacaatgagcaggacatcagaccacgctttcac
cgctcacgcacagtggcccagcgccatgagggcgagattattgatgatgaggaggatgat
gaagatgaacttgatgacaccatctcagactggaacctgcgaaaatgttcagctgcagcc
ttggatgttttggccaatgtgtttagagaagagcttttggtgcaccttctgcctctactc
aaggaacttcttttccactcagactggatagtcaaagagtctggtattttggttctgggt
gctatagctgaaggttgtatgcaaggcatgattccatatttgcctgagctcatacctcac
ctcatccagtttctatctgataagaaggctttagtgcggtctatcacctgttggaccctc
agtcgctatgctcactgggttgtaagccaacctccagatacttacctaaagcctctaatg
acagagcttcttcaaagaattctagacagcaacaagcgtgttcaggaggctgcttgtagt
gcctttgccactttggaagaggaggcatgcacagaattagtaccttatctggcattcatc
ttggacacattagtgtttgccttcagcaaataccaacataagaatctgcttatcctatat
gatgccatagggaccctcgcagattcagtgggtcaccatctcaataaacaggaatacatt
cagatgctgatgcctccattgattcaaaagtggaaccagcttaaagatgaagacaaagat
ctttttccattactagaatgtttgtcctccattgccactgcccttcaaagtggtttcctg
ccatactgtgagcctgtataccaacgctgtgtcaaccttgtccagaagactcttgcacaa
gccattcttcaccagtcccagccggaccagtacgaacctccagataaggactttatgatt
gtggctttagatcttctcagtgggctggctgagggcttgggtggaaccatagagcacttg
gttgctcgtagcaacattctcacactcatgtaccagtgtatgcaggacaaaatgccagag
gttcgtcagagttcgtttgctctactaggagatttgacaaaagcctgtttccagcatgtc
aaatcatgcattgctgattttatgcctatacttggtcaaaacctaaatccagaattaatt
tccgtttgcaataatgcaacatgggcaataggagaaatatccattcaaatgggacctgag
atgcagccatacattgccatggtgctgcatcagctggtggagatcattaacaggcccaat
actccaaagacactactggaaaatacagcaataacaattggtcgtcttggttacgtttgt
cctcaagaggtggcacccatgctacagcagtttataagaccctggtgtacgtctttacga
aatataagggacaatgaggagaaggactcagctttcagaggaatttgcactatgatcagt
gttaacccaggaggtgtggttcaggattttatattcttttgcgatgctgtggcttcttgg
gtaaatccaaaagatgatcttcgagacatgttttataagattcttcatgggtttaagaac
caggtcggagaagagaattggaagcgtttctcagatcagttccccatgcccctgaaggag
cggctagcgacattttatggagtttag
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integrated database retrieval system
