Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158189
Help
Entry
110158189 CDS
T05002
Symbol
col6a3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04510
Focal adhesion
bpec04512
ECM-receptor interaction
bpec04518
Integrin signaling
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110158189 (col6a3)
04518 Integrin signaling
110158189 (col6a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110158189 (col6a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110158189 (col6a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110158189 (col6a3)
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110158189 (col6a3)
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110158189 (col6a3)
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110158189 (col6a3)
Hyaluronan
Extracellular matrix or blood plasma proteins
110158189 (col6a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
110158189
NCBI-ProteinID:
XP_020778291
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
ETQGPKKDIVFLLDGSDGVGREFPILQEFMRRVVESLNVGENKIRIGVVQYADSPQADMY
LNSHSTKEAVLNAISGLRRRGGRQRNLGQALEFLDRDMITPARGSRRQEGVPQFVIGVSS
GSSTDNIQQAAASLKRSRVLPFSIGTRDVDPNELRILSYVPNFAYTVDDLPGLYTVQETL
INTLTEMSDDDIARLAPVFPEYVAPVTPAPSGDVKRDVVFLIDGTTAVRSEFPAIREMIR
RVVDKLDVGLDAVRISVEGVPQFLILVTGGKSSDDVSSAADQLKRNQIAPLAVGSKNADA
DELREISLKPEFAHKVDSFNELPSVENKLLDSVKTTSTTDIIQGYVPGPRPPVDVEIANL
GRKDIIFLIDGSDNTGASGIAHIRDFILNTVQQLDVQPDQVRVGIVQYSDRVKTEFSLNS
HNNKAAVLSAIKRLRQMGGRSSDLADAINYVIQNELKPSAGVRPIEASQHLVVLTGGRSS
QDVAIFGPLLRSARVNCIGVGASGADRRQLQQIATNPEDVLHVPTFPSLPVLKDTLITRL
RGTIEEIPTVIEVGGDAKKADIVFLVDGSINLGKDNFREVMNFVTNLIDLFYNEKDELRF
ALAHYATDVTDVFFLNTYNNKDDIISAIGRAEYKGGRRINTGAAIKHVQDKHFIKGKGSR
RDEGIPQILMLITGGRSADDSKAAALALKNTKTRIFTVGVGDNLDELETLASEPSTVARA
RTYQELSELNEQILEALADEVKGKPVCVLTETTAKPCNIEVLLGFDVNAQNIFSAQTNLQ
NKMGAILQRISKIASISCSSGQVPTIHLGMLAMGSSGDAVQLDFTDNANELFEGFRGLRT
RGPFVLNGQTISAYNTRFKSRQNDVVKVVIHLTDGLDGSFNEIKGRVDELQESGVNSFIL
VGLERVPKFEEALQLEFGRGFRYTRPLRVNLMDLDYELLEELDSIAERECCGVPCKCTGT
RGDRGAVGFGGQKGDPGLPGSQGHPGDEGGPGDRGPPGVNGTQGFQGCPGPRGSKGARGY
SGEKGENGELGLDGINGEDGKSGVAGAGGDRGTPGRRGPKGAKGQAGDRGELGIRGDPGQ
SGRDSNVRGPKGEPGDPGLPGEQGDDGTAGIRGDAGRRGSNGRRGAPGQPGAIGKPGPNG
EPGEPGVAGSRGKPGPPGTKGPKGEEGNPGPRGPGGRPGPGGAKGRPGALGRKGEPGDPG
VQGDQGPVGPRGEPGEDGRDGLGTPGPPGRKGDEGFPGLPGPKGPAGDPGSKGGPGKRGN
RGQRGVSGGMGSPGQGGEPGYPGPYGEKGPRGPGVVQCDLVKKIRDNCPCCYGKDECPLY
PTELAFAMDVSGNVGPAFNNMRETVLNLVRDITITESNCPRGARVALVMYNNEVTTEIRF
ADNLKKRALLSHIEGLQTRRTGKERNLATAMTFVAHNTFKRVRSGFLMRKVAVFFVAGAV
SNTQAITRAALKLHDAGIATVLLVNSENRELTRALTVNGTDLAQVIVLPGNTGSAQYKNA
LQMIKSCHVCYDACAPDRICTYSPPQLNRDKRSGITDADIDMSFVIDSSESTFPYTFTEI
KRYIAHIVEQLEISSDPINSLHQARVSVAQQAPYKYLQNRTGSPIHIDIGLTEHQSSQSV
VKFLTEKTPQLEGGRALAAAIESAVEDIFEKAPSPRDRKVLMLFVTGNVDKNEDQLVRIA
TEVKCRGYFLVIFGVGDGIRAGDARVLSRMASEPSEVFFKRINSLSEFYDKHILTFGQLM
PKYVTIENAFYMSPEVSKHCKWFQNDQPFKNPFITSHRGKHEKRHEKQQEVHHHKTHKES
DELHVFNITSNSMKFRWSSSDPKHFVYFEVVVTRLSDHALVLKTNVSGTELSLDNLQSAQ
SYHVVVTAQTADGSIVSTRKGIVTTKAAAPKPVILNTNTETTTTAPLEKPVTEPEPEPQK
EVKKEKQVEQKEVLPAPAEARAPVNICQQPKEEGTCAKFVLKWHYDSSSRSCTRFWYGGC
GGNQNRFETYEQCVKTCGRPVPIHQGAMTSVRT
NT seq
6044 nt
NT seq
+upstream
nt +downstream
nt
ctgaaacacaaggtccgaagaaggatattgtttttcttcttgatgggtctgatggcgttg
ggcgggagttcccaatcctccaggagttcatgagaagagttgtggaatccctcaatgttg
gagagaacaaaatccgtattggtgttgtccagtatgctgactctccacaagccgatatgt
atctcaactcccattcaaccaaagaggctgtccttaacgctataagtgggttacggagac
gtggaggaaggcaacgcaatctgggtcaagctctggagtttctcgacagggatatgataa
caccagcccgtggaagcaggaggcaagaaggtgtcccgcagtttgtaattggagtctcca
gtggttcttctacagataacattcagcaggctgcagcatcactgaaacgctccagagtcc
ttcctttcagcattggaaccagagatgttgacccaaatgaacttcggattctgtcctatg
tacccaactttgcgtacactgtggatgatcttcctggcttatacacagttcaagaaactc
ttatcaacactttgacagagatgtctgatgacgatatcgcaaggctggccccagtatttc
ctgaatatgtagcaccagtcacaccagccccatccggagatgtcaaaagagatgttgttt
tcctcattgatggaacaacagccgtgcgcagtgagtttcctgccattcgagagatgatac
gaagagttgtggataagctagatgtgggacttgatgctgttaggatctctgtggagggtg
ttccacagtttctcattttggtcactggaggaaagtcttctgatgatgtgtcatctgccg
ctgatcagttaaagaggaaccagattgcacctcttgctgttggctccaaaaacgctgatg
cggatgagctgagagaaatttctctgaaaccagaatttgcccataaagtcgactctttca
atgaacttccaagtgttgagaataaactgctggattcagtcaaaactacatccaccactg
atattatccaaggttatgtccctggacctcgacctcctgtggatgttgaaattgccaatc
ttggaagaaaggacataatcttccttattgatggctctgacaatactggagcctcaggca
ttgctcacatccgcgatttcatcctcaacactgtgcagcagttggatgtgcagccagacc
aagtgcgtgtgggaatagttcagtattccgacagagtcaaaactgaattctctctgaatt
cccacaacaacaaagcagctgttttatcggccattaagaggctcaggcaaatgggtggtc
gctcttcagaccttgcagatgccatcaactatgtcatacaaaatgagcttaaaccatcag
ctggagttcgcccaatcgaggcttcacaacatctcgtggtcctgactggtggacgatcat
cccaagatgtggctatttttggtccactgctcaggagcgctagggtgaattgtattggtg
ttggtgcatctggtgctgatagaagacagctacaacaaatcgccaccaacccagaagatg
ttcttcatgtgccaacgttcccatccctgccagtactcaaagacacgctcatcaccagac
tgagaggaacaattgaagaaatcccaactgtgattgaagttgggggtgacgcaaaaaagg
cagacattgtatttttggtagatggctccataaacttgggcaaggacaacttccgcgagg
tcatgaactttgtgaccaatctaatcgacctattctacaacgagaaagatgaactgagat
ttgcccttgcacattacgccacagatgtcactgatgtcttcttcctaaatacatacaaca
acaaggacgatattattagtgctattgggagggctgagtataaaggaggacgtagaatca
acactggtgcagcaatcaagcatgttcaagataagcatttcatcaaaggaaagggtagca
ggagagatgaaggcattcctcaaatccttatgcttattactggtggtcgatcagctgatg
atagcaaagctgcagctcttgcactgaagaataccaaaaccaggatctttacggttggag
ttggagacaatttagatgagttggaaaccctagctagtgagccatccactgtagccagag
caaggacctatcaggagctgtctgagctgaatgagcagatcctggaagcgcttgcagatg
aagtgaaggggaagcctgtctgtgttctgactgaaaccactgccaaaccttgcaacattg
aagtcctgctgggttttgatgtgaatgcccagaacatcttcagtgctcagactaacctcc
agaacaagatgggggccattttacagaggatttctaaaatagcatcgatcagttgctctt
cagggcaggttcctactattcatcttggaatgttggccatgggctcctctggtgacgctg
tacagttggatttcactgataatgcaaatgagctgtttgagggattcagaggactacgca
cacgagggccatttgttctcaatggacaaactatttcagcctataacacaaggttcaaaa
gcagacagaacgatgttgtgaaggttgtcattcatctgactgatggcttggatggatcat
tcaatgaaataaaaggaagagttgatgaactgcaggagtcaggagtaaacagcttcatcc
tggttggacttgaacgagtgcctaagtttgaggaggctttgcagcttgaatttggcagag
gtttcagatacaccagacctctgcgcgttaatctcatggacttggactatgagctgttgg
aagaacttgacagcatcgcagagagggagtgctgtggtgtcccatgcaaatgtacaggaa
ccagaggagacagaggagcagttggatttggtggacaaaagggagatccaggtcttccag
gaagtcaaggacatcccggagatgagggtggacctggagacagaggtcctcctggtgtga
atggtactcagggtttccagggatgtcccggaccaagaggctccaagggtgcacgaggct
attcaggagaaaagggtgaaaatggagaacttggtcttgatggcatcaatggagaagatg
gaaaaagtggagttgctggagcaggtggagacagaggaacaccaggcagaagaggaccca
agggggctaaaggtcaagcaggagatagaggagaattgggaatccgtggagaccctggtc
aaagtggtagagatagcaacgtccgtggacccaaaggagagcctggtgatcctggtctgc
cgggagaacaaggtgatgatggaactgcaggcatacgtggagatgctggcagaagaggat
ccaatggcagaagaggagcacctgggcaacctggagctattggaaaacccggtcccaacg
gtgagcccggagagcccggtgttgcaggctctagaggtaaacccggacccccaggaacaa
aaggacctaaaggagaggaaggaaaccccggaccaagaggacctggaggaagaccgggcc
caggtggagcaaaaggcagaccgggagctcttggtcgcaagggagagccaggagatccag
gagtacagggtgaccagggtccagtgggtccaagaggagaaccaggtgaggatggcagag
acgggttaggaactccaggaccaccagggagaaagggagatgagggattcccgggattac
caggacctaaaggaccagctggtgatcctggatccaagggtggaccaggaaagcgaggaa
acagaggacagaggggcgtctctggaggcatgggctctcctggtcagggaggagagcccg
gatatcctggaccatatggcgagaaaggtcctcgaggtcctggggttgtgcaatgtgacc
tggttaagaagatcagggataactgtccttgctgctatggcaaggatgagtgccctctct
accccaccgaactcgcttttgccatggacgtgtctggaaacgtgggtccggcattcaaca
acatgcgtgaaactgttctcaatttggtccgtgacatcaccatcaccgagagcaactgtc
ctcgaggcgcccgtgtggctctggtcatgtacaacaatgaggttaccacggagataagat
tcgccgacaacttgaagaaacgtgctctgctgagtcatatcgaaggactgcagacgagga
ggaccggaaaggagagaaacctggcaacggcgatgacttttgtggcacataataccttca
agagagtgcgaagtgggttcctcatgagaaaagtggcagtgttctttgtcgctggagcag
tgtcgaatactcaagccatcaccagagcagctctcaaactccatgatgctggaatcgcca
ctgtgctgctggtgaacagtgagaatagagagctaacaagagcactaacggtaaacggca
cagatctggcccaggtgatcgtcctcccaggaaacacaggaagtgctcagtacaaaaatg
ccctccagatgatcaagagctgtcacgtctgctatgatgcctgtgctcctgaccggatat
gcacctactcccctcctcagttgaaccgtgacaagagatctggcattaccgatgcagaca
tagacatgagttttgtgattgacagctccgagtccactttcccttacactttcaccgaaa
tcaaacgatacatcgcacacatcgtggagcaactagaaatctcctcagaccccataaact
ccctccaccaagcccgagtctcagttgcccagcaagcaccatataagtacctccaaaacc
gcactgggtcgcctattcacatcgatatcggcttgacggagcaccagtcatcacagagcg
tggttaaattcttgactgaaaagacaccgcagttagaaggaggtcgagcactagcagccg
ccatagaatcagcagtagaggatatttttgagaaagcaccatctccacgggaccgtaaag
ttttgatgctttttgtgaccggaaacgtggataaaaacgaagatcagctggtgagaattg
ccacagaggtgaagtgtagagggtatttcctggtgattttcggagtcggagatggaataa
gggccggagatgccagagtcttgtcccggatggcgtctgaaccatcagaagtgttcttta
agaggataaacagtctatcagagttttacgacaagcacatcctgacatttggacagctca
tgcccaaatatgtcaccattgaaaatgccttctacatgtctcctgaagtctccaaacact
gcaagtggttccagaacgatcagccattcaaaaacccgttcataacatcacaccgcggga
aacatgagaaacgccatgaaaagcagcaggaggtccatcatcataaaacacacaaagagt
cagatgagcttcatgtctttaacatcacctccaacagtatgaagttccgctggagcagct
cagaccccaagcactttgtttacttcgaggtggtggtgactcgactgagcgatcacgcct
tggtcctgaagacaaatgtgtctggtactgaactgtccttggacaatctgcagagcgccc
agtcctaccatgtcgtcgtcacggcgcagacagccgatggaagcatcgtatccacacgca
agggaattgtcaccaccaaagcagcagcgcctaaaccagtcatcctcaacaccaacactg
aaactacaaccacagctcctctggagaaaccagtaacagagcctgagccagaacctcaaa
aagaagtaaaaaaagagaagcaggtggagcaaaaggaggtcctcccagcaccagcagagg
cccgtgccccggtgaacatctgccagcagcccaaagaggaggggacgtgtgcgaagtttg
tcctgaagtggcactacgacagcagcagtaggagctgtacgcgcttctggtacggaggct
gcggaggaaaccagaaccgctttgagacctacgagcagtgtgtcaaaacatgcggcagac
cagtccccatccaccagggagccatgacgtctgtaagaacataa
DBGET
integrated database retrieval system
