Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110161252
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Entry
110161252 CDS
T05002
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpec03016
]
110161252 (tsen54)
Transfer RNA biogenesis [BR:
bpec03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110161252 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
110161252
NCBI-ProteinID:
XP_020781637
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MADQNAGSSKLNFYSEVLTPSELFAARSRSHKIPVRGQKDFMPDGSEEQKQKLEQALEEH
WSLISEERVERLGSLVKGVWIPEEQIIELQTPAGRFWQTMGFSANGKQYLLPEEALFLME
CGNVQVFHQDLPFSIQDGYENFLSSKSITFQQYLVYGHLKRLGYVVLRFDPSSEPSAYAR
QLNLPVSKDRAPRGNKRKRSPSPPCPSNSQGGTTVEQMEQEPEGQQPATPSCQSEGESME
EEPDLKQEVIRRSRVKQGSWWTPGKTSGSSSTSGSREWDFSSINFPDVGSALRSRPDDVV
SLAAPDPSLLPGALSVGPCDVTRWRRRINLKEVYMSPKDRQREEEANRQWMDVNRDPEVR
RCRSWSEYRALLARRGSDARGRPGHLWDRDVTPLHDPRQIIPHEELLDKIGIIKSTNLLE
GASSLKPLDNWKISFSVFQPDSASTFKKSSPGRPYARMVVCSFNDPVPDLTVLKQLSSQS
PEVALVFAAVDHGDISFYTFKDFHIPKDVFP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaatgcaggcagctccaaactaaacttctacagcgaggttctcactccg
tctgagctgtttgcggcgcgttctcggagtcataagatcccagtgagagggcagaaggac
ttcatgcctgacggttccgaggagcagaaacagaagctggaacaggcccttgaggagcac
tggagtttaatctcggaggaaagagttgaacgactaggaagtttagtgaaaggtgtgtgg
atacctgaagagcagatcattgagcttcaaactccagctggaaggttttggcagacaatg
gggttttcagctaatgggaaacagtatctgctccctgaagaggccctgttcctcatggag
tgtgggaacgtacaggtgttccaccaggatctgcctttttcaattcaggatggatatgag
aacttcctgtcatcaaaatcaatcacttttcagcaatatctagtttatggacacctgaag
aggctgggatatgtggtgctcaggtttgatcccagttcagagccatctgcatatgcgcgt
cagctaaacctgcctgtgtccaaagacagagccccaagaggcaacaagaggaagcgcagc
ccctctcctccttgtccaagtaacagccaaggtggaaccacagtggagcaaatggagcaa
gaacctgaagggcaacagcctgcaacgccaagctgtcagagtgaaggtgagtcaatggag
gaggagcctgacttgaagcaggaagtgatccgaaggtccagggtcaaacagggttcatgg
tggactccagggaaaacctcaggatccagctccacgtctggatcgcgagagtgggacttc
agctcgataaacttccctgatgtgggctctgccctcagatctcggcctgatgatgttgtg
tctttggccgctcctgatccatctcttcttcccggggctctgtctgtcgggccctgcgac
gtcacccgctggaggcggaggataaacctaaaggaggtctacatgtcgccaaaagatcga
caaagggaagaggaagcaaacagacagtggatggacgtcaacagggacccagaggttcgt
cgatgcaggagttggtcggagtatcgggcgctgttggccaggcgggggtcagatgccaga
ggtcgtccaggtcatctttgggacagagacgtcacgcctcttcacgaccccagacagatc
ataccccacgaggagctactggacaaaatcggtatcatcaagtcaactaatttactggaa
ggagcttcgagtttaaaacctttggacaattggaagatcagcttcagtgtttttcagcct
gactctgcatctacttttaagaagagcagtccagggaggccctatgcacggatggtggtt
tgcagtttcaatgaccctgtcccagatttgactgtcttaaagcagctgtcctctcagagt
ccagaagtggcgctagtcttcgctgcagttgaccacggagacatttccttttatacattt
aaggacttccacatccccaaagatgtcttcccttga
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