Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110164563
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Entry
110164563 CDS
T05002
Symbol
tardbp
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110164563 (tardbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110164563 (tardbp)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110164563 (tardbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
110164563
NCBI-ProteinID:
XP_020785282
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MADMYIRVAEDENEEPMEIPSEDDGTVLLSSVAAQFPGACGLRYRNPETQCMRGVRLVEG
VLHAPESDWGNLVYVVNYPKDNKRKMEEIDAASAVKIKRGFQKTSDLIVLGLPWKTTEQD
LKDYFSTFGEVIMVQVKRDTATGNSKGFGFVRFTDYEIQTKVISQRHMIDGRWCDCKLPN
SKTSPDEPTRCRKIFVGRCTEDMSPDDLRQYFMQYGEVTDVFIPKPFRAFAFVTFADDQV
AQALCGEDLIIKGVSVHISNAEPKHNNSRQMMDRGRFGGAGGFNKGFANNRGGMGGGSGG
VNFGALGLPPAMVAAAQAALQSSWGMMGMLASQQSLTTTAGTAPTTRDQTYTTPSTSYSS
PTSASLGWTGGSTTPSGGSFNSGFNSMESKSSNWGI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatgtacattcgtgtggccgaggacgagaacgaggagcccatggagatccca
tctgaagacgacgggacggtgctgctgtcctccgtggccgctcagttcccaggggcgtgc
gggctgcggtaccgcaaccccgagacccagtgcatgaggggggtccggctggtggagggc
gtcctccatgcgcctgagagtgactggggtaacctggtctacgtggtcaactaccccaaa
gataataaaaggaagatggaagaaatagatgctgcgtcggctgtgaaaatcaaaagaggc
tttcagaagacatcagatctcattgtgctcgggttgccatggaagacgacagagcaagac
ttaaaggactatttcagtacctttggagaagttatcatggtgcaggtaaagagagacaca
gccactggaaattcaaaggggtttggctttgtccggttcactgactatgaaatacaaact
aaagttatttctcaacgacacatgattgatgggcgatggtgtgactgcaaactgcccaac
tcaaagacttctcctgatgagcccacaaggtgtagaaaaatctttgtgggccgctgcaca
gaggatatgagccctgacgacctgaggcagtacttcatgcagtatggagaagtcactgat
gtgttcatcccaaagccgttcagagctttcgcctttgtcacttttgcagatgaccaggtc
gcgcaagccttgtgtggggaggacttgatcatcaaaggagtcagcgtacacatctcgaat
gctgagcccaaacacaacaatagtaggcaaatgatggatcgtgggcgctttgggggggca
ggtggattcaataagggctttgccaataaccgcggtgggatgggtggtgggagtggaggg
gtaaattttggggctctgggtcttccccctgcaatggtggctgctgctcaggccgctcta
cagagcagctggggcatgatgggtatgttggccagtcaacagagcctgaccaccacagct
ggcactgcccccaccacacgagaccagacctacaccacccccagcactagctacagcagc
cccacctcggcctccctgggctggactgggggcagcaccacaccatctggaggtagcttc
aactcaggcttcaactccatggagtccaagtcatctaactggggaatatag
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