Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110164732
Help
Entry
110164732 CDS
T05002
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04510
Focal adhesion
bpec04512
ECM-receptor interaction
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110164732 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110164732 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110164732 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bpec00535
]
110164732 (col9a3)
Proteoglycans [BR:
bpec00535
]
Extracellular matrix (ECM) proteoglycans
Others
110164732 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110164732
NCBI-ProteinID:
XP_020785501
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MARFSALWVLLLCQLLTWSSAQRPGPRGSPGQPGPPGPPGKDGTDGKPGPAGLPGKAGPK
GKAGIPGKSGQPGLPGLPGVDGMIGPDGPAGKDGPTGEAGEAGPTGPAGPPGRGRAGAPG
LPGTNGLPGGLGPQGPTGPEGLPGLPGPPGPDGPPGLPGTLQDLNGDLLCPAICPPGPPG
PPGMPGFKGHTGHKGDKGEVGKDGEKGDAGPPGPPGIPGTVGLQGPRGLRGLQGPMGPVG
DRGLPGFRGKPGAAGLIGKTGDAGEKGPQGFRGPKGEMGKIGPKGAPGGPGPKGEPGIPG
RDGKDGTPGLDGEKGDAGRHGVVGEKGPNGLPGLQGKAGAKGSKGEVGDPGKTGETGPSG
EPGIPGEIGIPGERGIAGPRGVAGGIGPIGNDGPQGIKGFQGMKGALGDPGLPGPTGIRG
EFGERGPVGASGAKGDMGVAGSDGLPGENGEPGPFGPVGQKGEPGKHGELGPKGVTGPQG
ELGARGPPGKQGLMGLQGEQGMPGIAGKTGVPGKLVSEQHIRELCGSMIDDQIAQLAANL
RRPLAPGLVGRPGPAGLPGKPGVVGSIGHPGARGPPGYRGLPGELGDPGPRGDIGEQGDK
GPIGKAIEGPVGDQGYQGLPGVPGIVKDGRDGSPGDPGEPGEPGRVGRTGHQGPPGICDT
SACQGAAPNGKSTNPKNH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggttctccgcgctctgggtgcttctactgtgccaactcttgacgtggtcatcc
gcacagaggcctgggcccagaggatcccctgggcagccaggacccccaggacctccagga
aaggatggcacagacggtaaaccaggccctgctggtctaccagggaaagcaggacccaaa
ggaaaagctgggattcccggaaaatcaggacaaccaggcttgcctggacttcctggagtg
gatggtatgattggtcctgatggcccagccggaaaagatggacctacaggagaagctggt
gaagcaggacctactggaccagccgggcctccgggcagagggagagcaggagcaccaggt
ttacctggaactaatggcctaccaggcggtcttggaccacaggggcctactggtcccgag
gggcttcctggacttcccggcccacctggtcctgatggccctcctggtctcccaggcaca
cttcaagatctcaatggtgaccttctctgtccagctatctgcccccctggtccccccggc
ccacctggaatgccaggatttaagggtcacactggacacaaaggagataaaggagaggtt
gggaaggacggagagaagggagacgctggtcctccagggccccctggtattccaggcact
gtgggtctgcagggcccacggggtctgagggggctgcaggggcccatgggtccagtggga
gacagagggttgcctggcttcagaggcaaacctggtgctgctggcctcattggaaaaaca
ggcgacgctggagagaaagggccacaagggttcagaggaccaaagggcgagatgggtaaa
attggtcctaaaggagcacctggagggcctgggcctaaaggggagcctggtattccaggg
agagacggcaaagatggcacaccaggactggatggagagaagggcgatgctgggcgccat
ggtgtagtcggagagaaaggaccaaatggacttcctgggctccagggaaaagctggtgca
aagggatctaaaggagaagttggagacccagggaagactggtgagacgggaccctctgga
gagccaggtattcctggtgagattggtatcccaggagagcggggaatagcagggcctcga
ggagtagctggaggaattgggcctattggcaatgatgggcctcagggaatcaagggcttc
caggggatgaaaggagctctaggggatcctggtctgcccgggccaacaggaatccgagga
gagtttggtgaaagaggtccagttggtgcttctggggctaaaggagatatgggtgtggcg
ggaagtgatggtttgccaggagaaaatggagaacctggtccatttggtccagtgggtcaa
aagggagagccagggaaacacggtgaactggggccaaagggtgtgacaggaccacagggt
gagcttggtgctagaggaccccctggaaaacaaggtctaatgggcttacagggagaacaa
gggatgcccggaattgcaggaaagactggcgtaccgggtaaactggtgagcgagcagcac
atcagagagctgtgtggatctatgattgatgatcagattgcacagctggcagctaacctc
agacgacctctggctccaggactggtcggtcgacctggcccagcagggctccctggcaag
cctggtgtagttggctccataggtcacccaggcgcccgaggaccccctgggtatagaggg
cttccaggagaactgggagaccctggtccaagaggtgacattggtgagcagggtgacaaa
gggcccatcggcaaagctattgagggtcctgttggagaccaaggataccaaggtcttcca
ggagtgcctggtattgtgaaggatgggcgtgatgggtccccgggagaccctggtgagcct
ggagagccgggcagagtaggaaggactggacaccagggaccccctggaatctgtgacaca
tcagcctgccaaggggcagcccctaatgggaaatctacaaaccccaaaaaccattaa
DBGET
integrated database retrieval system
