Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110166521
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Entry
110166521 CDS
T05002
Name
(RefSeq) collagen alpha-2(VI) chain-like isoform X1
KO
K06238
collagen type VI alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04510
Focal adhesion
bpec04512
ECM-receptor interaction
bpec04518
Integrin signaling
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110166521
04518 Integrin signaling
110166521
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110166521
09142 Cell motility
04820 Cytoskeleton in muscle cells
110166521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110166521
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110166521
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110166521
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110166521
Hyaluronan
Extracellular matrix or blood plasma proteins
110166521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
GxGYxYP_C
Motif
Other DBs
NCBI-GeneID:
110166521
NCBI-ProteinID:
XP_020787426
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MALTGMLLLCLLQTAASQLVPRGPRPIPGRGDQPLVTPAPQLQPTLPPSPEGCEREIDCP
IQVYFTIDTSETIALQQPPPGQLFESVREFTKTFAQKLNDENYRGQIKITWSIGGLHYSQ
TQEFFSSLTNKATFISRLSGIKYLGKGTYTDCALKNMTHQMTHQYQDSKAVRFSVVISDG
HVTGSPCGGIKIMADRAREEGIQIFSVAASRVIDELGMREIASSPTDVYRDDFLAVDIVN
GRPTIMTKTIDRIIKTMKYQAYLQCYKTPCYETPGPPGLKGHKGLKGIKGGRGFAGPKGE
KGREGDPGIEGPIGRPGPKGGMGPKGDKGDMGALGAKGTGGDHGRNGTDGQKGKRGHIGA
PGCKGDPGDRGPDGFSGDVGDSGQPGDKGDKGDIGLPGKAGPPGSVGEPGAKGESGDAGY
PGEQGQKGSKGLKGLPGQRGQPGRAGDPGPKGAPGQDGPGGEKGERGPTGSSGRPGEEGT
KGAKGGMGLPGPRGSPGEEGSPGSPGSVGDYGEQGPSGQPGPPGPIGENGRQGFSYTGSR
GPTGEKGDKGKRGPRGGRGHCGDKGEAGTKGVPGEPGEPGPPGHPGERGPRGEPGPDGDP
GPMGDPGLTECDVMTYIRETCGCCDCEKHCGALDIVFVIDSSESVGLSNFTLEKNFVINT
INRLGSMASDPTSPTGTRVGVVQYSHNGTFEAVRLDDPNIDSISAFKMAVKRLEWIAGGT
FTPSALKFAYDTLIRNSKRARSKVSMVVITDGRFDPRDDEDLLTYICSDAQVEVNAIGVG
DMFGKMQQNETLLSIACNNNKRVTEMRRYADLMAEDFIDKVETWICPEPFTVCPDLPCKQ
EPDVAPCVNRPVDLVFLVDGSERLGDENFLRLGELVRRVADSVGLARSKTDRTRARVALV
QFGRESEHTIAFPLTHDPAVISEGLERLRYLDSSSDIGSAISYTIDNILQQGEVRRYAEI
SFVFITDGVTASESLEEAVSAMRRAHVVSTVIATGSDVDQAVLRKLVMGDQDAIFQGKDF
SSLLQSSLFNKFITWVC
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggccctcacagggatgctccttctgtgtctgctccagactgcagcctcacagctggta
cctcgaggtcccagacccatcccaggccgaggggaccagcctcttgtcaccccagctcca
caactacagccaactctgcccccaagtcctgaaggttgtgagagagagatcgactgtccc
atccaggtctacttcaccatcgacacttcagaaactattgcgttacaacagcctccccct
ggacaactgttcgaaagcgtccgcgaattcaccaagacattcgcgcagaagctgaatgac
gagaactacaggggtcagatcaagattacttggtctattggcggtttgcactactcccaa
actcaggaattcttcagctcattgaccaacaaagccacctttatcagtcgcctcagtggc
atcaaatatctgggcaagggcacctacacggactgcgccctcaagaacatgacgcaccag
atgacccaccagtaccaggactcgaaggcggtgcgcttctctgtagtgatcagcgacggg
cacgtgactgggagtccctgtggtggcatcaagatcatggcagacagagcaagagaggag
ggaatccagatcttttccgtggcggcttccagggtcatcgatgaactgggcatgagggag
atcgccagctcgcccaccgatgtctacagggacgacttcctggcagtggatatagtgaac
ggacgacccacgatcatgacgaagaccattgatcggattatcaaaactatgaaatatcaa
gcatatttacagtgctataaaactccatgttacgagacacccggacccccaggtctaaag
ggtcacaaaggcctaaagggaattaaaggaggtcggggttttgctggaccaaaaggtgaa
aagggtagagagggagatcctggtatagagggacccatagggcgccctggaccaaaggga
ggaatgggtcctaaaggagacaaaggggacatgggagcattgggagcaaagggaacagga
ggagatcatggcaggaacgggactgatggacaaaagggtaaacgtggccacattggagct
ccaggctgtaaaggggatccaggagacagggggccagatggtttttcaggagatgtgggt
gactcaggacaaccgggcgacaaaggtgataagggtgacattggattgccaggaaaggcc
ggtcctccaggctcagtcggtgaaccaggagccaagggggaaagcggagatgctggctac
ccaggagagcagggccagaaaggctcaaaggggcttaaggggctacccggtcaacgagga
caaccgggaagagcaggagatcctggtccaaagggtgctccaggacaggatggaccaggt
ggagaaaagggggaacgaggaccaactggaagctctggtcgacctggggaagaggggacg
aagggagcaaagggaggaatggggcttcctggtccaagaggttcaccaggagaagagggg
agtccaggatcacctggctctgtgggagattatggagaacaggggcctagtggacaacca
ggacctccaggaccaataggcgaaaacggaaggcaaggattcagctacactggatcaagg
ggaccaacaggagagaaaggtgataaaggaaaaagaggccccagaggaggaagaggccac
tgtggagacaaaggagaggctggaacaaaaggagtgcccggagagcctggggaaccaggg
ccaccaggtcatccaggagagagaggacctagaggagagccaggtcctgatggtgatcct
ggaccaatgggggaccctggactgactgagtgtgacgttatgacatatatcagagagact
tgtggttgttgtgattgtgaaaagcattgcggagccctggacatcgtgtttgtgattgac
agttcagaaagtgtagggctgtccaacttcactctagagaagaactttgtaatcaacacc
ataaacagactgggatctatggccagtgaccccacttcacccacaggtacaagagttgga
gttgtacagtacagtcataatggtacctttgaagccgtccgcctcgacgatccaaacata
gactccatatcagctttcaaaatggctgtgaagagactggagtggattgctggagggaca
ttcaccccctcagctttgaaatttgcctatgataccctgattcgcaacagcaagagggca
cgctccaaagtgtccatggtggtgatcacagacggaagatttgatccacgtgacgatgaa
gatctgctcacatatatttgcagcgatgctcaggtggaagtaaatgcgattggggtgggg
gacatgtttggcaagatgcagcagaatgagacgctcttgtctatagcgtgtaataacaac
aagagagtcactgagatgaggcgttatgcagatctcatggcagaggacttcattgacaaa
gtagagacttggatttgtccagagccttttactgtgtgcccagaccttccctgtaaacaa
gagcctgatgtggccccatgtgtgaaccgccctgtagatctggtgtttctggtggatggg
tctgaaaggctgggggatgaaaacttccttcgtttgggtgaactggtgcggagagtcgca
gacagtgtgggtctggcacggagtaaaacagaccgtacgagggcgcgtgtggctctggtg
cagtttggcagagagagcgagcacaccatcgcttttcctctcactcatgaccctgccgtg
atctctgagggcctggaacgtctacgatatctggactcttcctctgatataggctcagcc
atctcctataccatagacaatatactccaacagggagaggtaaggcgctatgcagaaatc
tcttttgttttcatcacggatggagttacagccagtgaaagtttggaggaggccgtcagt
gccatgcgcagggcacatgtggtctccacggtaattgcaacaggaagtgatgtcgaccag
gcggtcttgcgtaagctggtcatgggagaccaagatgccatctttcaaggaaaagatttt
tcaagtctcctgcagtcctcattgtttaacaaattcattacatgggtttgttag
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