Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169932
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Entry
110169932 CDS
T05002
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110169932 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110169932 (lsm1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110169932 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
110169932 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
110169932
NCBI-ProteinID:
XP_020791201
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTVLQQVPIEEILEEQRLQQQAKQETEKVKMQVLKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccggggacagctagtctcatagacgacatagacaagaaacacttggtg
ctgctccgtgatggaagaacattgattgggtatcttaggagcattgatcagtttgccaat
ttagtatttcaccagaccgtggaacggattcacgtgggaaagaaatttggcgacatccct
agagggatatttattgtgagaggagagaatgtggttctgctcggtgaaatagatgtggat
aaaccctgtgacacagttttgcaacaagtccctattgaagagattctggaggagcaacga
cttcagcaacaagccaaacaagagactgaaaaagtcaaaatgcaggtgctgaaagaccga
ggtctttccataccaaaggctgacaatttggatgaatactaa
DBGET
integrated database retrieval system
