Bacteroides pectinophilus: NQ488_10690
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Entry
NQ488_10690 CDS
T09080
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bpen
Bacteroides pectinophilus
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_10690 (addA)
Enzymes [BR:
bpen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ488_10690 (addA)
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NQ488_10690 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UWN95038
LinkDB
All DBs
Position
complement(2273924..2277601)
Genome browser
AA seq
1225 aa
AA seq
DB search
MARNWTAQQKRAIELHNKNILVSAAAGSGKTAVLVERIIRMITDPDNHVDIERLVVVTFT
NAAAAQMRERIGAALESMIEENPSDRNLQRQLAMIHMAQITTIDSFCLNILRNNYMNLDI
DPGFRIADQGELELIKADVMGELLEKYYAGGNEDFYALINSYSGKKSDKAIEDLINKIYN
YARSYPWPHEWLQSCIDTGSASTVDEFNESLPAQYLFDYVTKYIQGSREKFRRLLDICKD
VAGPDMYIDNILSDLEGMDMLLNTENISQWMETAARIQFTDLSRKRGSGVDPDMKELVRN
SRTKYRDSFRKLRDRLCSMSVEEYLRELSANGAPLRMLITLASEYMDAVDAAKKEKNIID
FNDIEHMACSLLVKHENDTDEYTQLADDLASYYGEILIDEYQDSNMLQEMILTAVSRGRL
DSSRNNLFMVGDVKQSIYKFRLARPELFLDKYVKYPDADGCEVIELRNNFRSRSQVLYSV
NSVFEKIMHRECGGIEYTEDVRLNPGLEFAQRTDSGMMDNRTSIRLADLNIQYDEDDVNT
PRECEGRLIASIIKEVIDEDTGMPVYDERLGTYRKAEYGDIVVLTRSLDGWADVFADELM
NAGIPAAAQSSSGYYDTYEIEQVLNLLAVIDNPAQDIPLAAVALSYFGTLDVNDLALVKS
AYPDARLYESMNRYLNSHADNQDEICAKINNLLTMIEGYRTKSVYLTINELIWKIIYDTG
FYDYVGMMPAGSMRQQNLDMLCDKAESYARTSYHGLFNFLRYIEKIRKYNLDSQSGASDM
SDNNAVQIMSIHKSKGLEFPIVIVAGIAKKFNNMDARGRVVVDSDIGVGADIIDTVMRTK
VSTPVKSAVEMKLVDDNLAEEMRILYVAMTRAKEKLIMTGTLKNYDKMCAKWKTTDVSTF
DGIQGCSSYMDMIMPVACGDAVNFDISVTEINKEPDEDEYNGDKHDIMAHNAADIHEAAK
KGAVSIEPYRYGYAVTMKTKLSVSEIKLHEYEEQEEFTRDVLPELNAANNGKSGSESGIE
GVQPAYEPCVPQFISKKEDVAPAERGTAFHRVMECLDYNRCGSVDDIRGYIDELVDRNMM
TRRQADAVNPQKVYDFCNSSIGARTAEAFRAGRLYREQPFVMGIPAGSIKIYQELADRYN
VSYSLLDEETVLIQGVIDMYFEENGKVVLVDYKTDRVSGSNAEKILRDHYTIQLELYSEA
LERALGMEVSEKLIYSFTLDKAVNV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaattggacagcacaacagaagagggcaattgaactccataataaaaatatt
cttgtctcagcagcagcaggctccggcaagacggcagtccttgttgagagaataatacgc
atgataacggatcctgataaccatgtggatatagagcggctggtggtcgtaacatttacc
aacgcagctgcggcacagatgcgcgagcgtataggagctgcacttgagagtatgattgag
gagaatccgtctgacaggaatctccagaggcagcttgcgatgatacatatggcacagata
acaacaatagacagcttctgccttaacatactgcgtaataattatatgaatctcgatatt
gacccgggattcaggatagcagaccaaggtgagcttgaacttattaaggccgatgttatg
ggtgagctgcttgaaaaatattatgccggcggcaacgaggatttttacgcacttatcaat
tcgtattcggggaaaaagagcgacaaggcaatagaagaccttattaacaaaatatataat
tatgccagaagctacccatggccgcacgaatggctgcaaagctgcatcgacacgggaagt
gcgtcaactgtggatgagttcaatgaatcgcttccggcacagtatctgtttgattatgtc
acaaaatatattcagggaagccgtgaaaagttcagacggcttcttgacatatgtaaagat
gttgcagggcctgatatgtacattgataatatattgtcagaccttgaaggcatggatatg
ctgcttaatacagagaacatctcacagtggatggagactgccgcaagaatacagttcacg
gatcttagcagaaagcgtggaagcggcgttgatcctgatatgaaggagcttgtcaggaat
tcaaggacaaagtaccgtgattcattcagaaagcttcgtgacaggctgtgttcaatgagc
gttgaggagtatctgcgtgagctttcggctaacggggcacctctgagaatgcttattacg
cttgcatccgaatatatggatgcggtggatgccgccaaaaaagaaaagaatattatagat
tttaacgatatagaacacatggcgtgcagtctgcttgtaaaacatgagaatgatacagac
gaatacacacagcttgctgatgatcttgcatcatattacggggagattctgattgatgaa
tatcaggacagcaatatgcttcaggagatgatattgacagcggtatcacgcggaaggctt
gacagcagccgcaacaatctttttatggtgggtgatgtcaagcagagtatttacaagttc
aggcttgcaagaccggagctgtttcttgataagtatgtgaagtatcctgatgctgacggc
tgtgaagtaatagaactgcgcaacaacttccgcagcagaagccaggtattgtattctgtc
aattcggtttttgagaagattatgcacagagaatgcggtggaattgaatatacagaggat
gtcagacttaatccgggacttgaatttgcacagaggacagactcaggaatgatggataac
agaacatcaataagactggcagacctgaatattcaatatgatgaagatgacgttaatact
ccaagggaatgtgaggggcggcttatcgcatcaataataaaagaggttattgatgaagat
acgggaatgccggtgtatgatgagcgtcttggcacatacagaaaagctgaatatggagat
atagttgtgctgacaaggtcgcttgacggatgggctgatgtgttcgctgacgagcttatg
aatgcgggaataccggcggctgcacagagctcaagcggttattacgatacatacgagatt
gaacaggtacttaatctccttgcggttatagacaacccggcacaggatattcctcttgca
gctgttgcactgtcttattttggcacacttgatgtaaatgatcttgcattagttaagagt
gcatatccggatgcccggctttatgaatcgatgaacagatatcttaattcgcatgcggac
aatcaggatgagatatgtgccaaaatcaataatctgctcacaatgattgagggttacagg
accaaatcagtatatcttacaattaatgaacttatatggaagataatatatgacacagga
ttttatgattatgtggggatgatgccggcgggaagcatgcggcagcagaatcttgacatg
ctttgtgataaggcagaaagttatgcccggacaagttatcatggtttatttaattttctc
aggtatattgagaagataagaaagtataatcttgactcgcagtcaggggcatcggatatg
tctgacaataatgctgtacagataatgagtatacataagagcaaaggtcttgagttcccg
atagtaatagttgccggaattgccaaaaagttcaataatatggatgcgagaggccgcgtt
gttgtagattccgatataggcgtaggtgcggatataatagacacagtgatgcgtacgaaa
gtttctacaccggtgaaaagcgctgtagagatgaagcttgttgacgataatctggcagaa
gagatgcgtattctctatgttgcgatgacaagagccaaggaaaagcttataatgaccggt
actctgaaaaattatgataagatgtgtgcaaagtggaagacgactgacgtatcaacattt
gacggaattcagggctgctcaagctatatggatatgattatgcctgtagcatgcggtgac
gcagtgaattttgatattagtgttaccgaaattaataaggagccggatgaggatgagtat
aatggggataagcatgatataatggctcacaatgcagctgatattcatgaagcagctaag
aaaggggctgtcagcattgaaccttaccggtacggatatgcggttacaatgaagacaaag
ctgtcagtatctgagattaagctgcatgaatatgaggaacaggaagagttcacaagagat
gtcctgccggaacttaatgcggcaaacaatgggaagagcggcagtgagagcggtatagaa
ggtgtacagcctgcttacgagccgtgtgtgccacagttcataagcaaaaaagaggatgtg
gcaccggctgagcgcggaaccgcatttcacagggttatggagtgtcttgattacaaccgt
tgcggcagtgtcgatgatataagaggatatattgatgagcttgtcgataggaatatgatg
acgcggcggcaggcggatgctgtgaatccacagaaggtatatgatttctgtaacagcagt
ataggtgcaaggaccgcggaagcattcagggcaggaagattatacagggagcagccgttt
gtaatgggtataccggcgggcagtataaagatatatcaggaacttgctgacagatataat
gtgtcttactcactgcttgatgaagagacagtactgattcagggtgtaattgatatgtat
tttgaagagaatggcaaagttgttcttgttgattacaagacagacagagtatcaggaagt
aacgctgaaaagatactgagagaccattatacaatacagcttgaattatattcggaagca
cttgaacgtgcattaggcatggaagtcagtgagaaacttatatattcatttacgttagac
aaggcggttaatgtctga
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integrated database retrieval system
