Bordetella pertussis B1917: B1917_1976
Help
Entry
B1917_1976 CDS
T03638
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
bpet
Bordetella pertussis B1917
Pathway
bpet02024
Quorum sensing
bpet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1917_1976 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1917_1976 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpet03019
]
B1917_1976 (hfq)
03036 Chromosome and associated proteins [BR:
bpet03036
]
B1917_1976 (hfq)
Messenger RNA biogenesis [BR:
bpet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B1917_1976 (hfq)
Chromosome and associated proteins [BR:
bpet03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
B1917_1976 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SRP14
Motif
Other DBs
NCBI-ProteinID:
AIW92333
LinkDB
All DBs
Position
complement(2095086..2095322)
Genome browser
AA seq
78 aa
AA seq
DB search
MSNKGQTLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaagggcaaactttgcaagatccgtttctgaacacgctgcgcaaggaacac
gtgcccgtgtccatctacctggtaaacggcatcaagcttcaggggcagatcgaatcgttc
gaccagtatgtcgtgctgctgcgcaataccgtgacccagatggtgtacaaacatgccatc
tccaccgtggtgccggcgcgcgccgtcaatttccaggtggaagttcccgctgaataa
DBGET
integrated database retrieval system