KEGG   Bordetella pertussis B1917: B1917_1976
Entry
B1917_1976        CDS       T03638                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
bpet  Bordetella pertussis B1917
Pathway
bpet02024  Quorum sensing
bpet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B1917_1976 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B1917_1976 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpet03019]
    B1917_1976 (hfq)
   03036 Chromosome and associated proteins [BR:bpet03036]
    B1917_1976 (hfq)
Messenger RNA biogenesis [BR:bpet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     B1917_1976 (hfq)
Chromosome and associated proteins [BR:bpet03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    B1917_1976 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 SRP14
Other DBs
NCBI-ProteinID: AIW92333
LinkDB
Position
complement(2095086..2095322)
AA seq 78 aa
MSNKGQTLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaactttgcaagatccgtttctgaacacgctgcgcaaggaacac
gtgcccgtgtccatctacctggtaaacggcatcaagcttcaggggcagatcgaatcgttc
gaccagtatgtcgtgctgctgcgcaataccgtgacccagatggtgtacaaacatgccatc
tccaccgtggtgccggcgcgcgccgtcaatttccaggtggaagttcccgctgaataa

DBGET integrated database retrieval system