Bordetella pertussis 137: Q425_7300
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Entry
Q425_7300 CDS
T03754
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpeu
Bordetella pertussis 137
Pathway
bpeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q425_7300 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpeu03019
]
Q425_7300 (pnp)
03016 Transfer RNA biogenesis [BR:
bpeu03016
]
Q425_7300 (pnp)
Enzymes [BR:
bpeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Q425_7300 (pnp)
Messenger RNA biogenesis [BR:
bpeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q425_7300 (pnp)
Transfer RNA biogenesis [BR:
bpeu03016
]
Prokaryotic type
tRNA degradation factors
Q425_7300 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
DUF5813
SLS1_KH2
KhpA-B_KH
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AJB25538
LinkDB
All DBs
Position
725610..727769
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AA seq
719 aa
AA seq
DB search
MFNKVTKTFQYGQHSVVLETGEMARQASGAVLVSVEDTVVLATVVAAKKAKAGQDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEGFYNDVQVVIHTLSV
NPDIDPDIPAMIGASAALAISGIPFNGPIGAARVGYVDGQYVLNPTATQLKSSKMDLVVA
GTENAVLMVESEAKQLSEEIMLGGVVFGHEQMQAAINAIHDLVRDAGKPDWDWQPAPKNE
ALIAAVSAAAQEGLNAAYQIREKQARTTKLREVYAAVQAAMAEQAAQAGQPAPDSVGVDN
ILFDLEARIVRSQILNGEPRIDGRDTRTVRPISIRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRALLPLL
PAPEDFQYTIRLVSEITESNGSSSMASVCGGSLAMMDAGVPTNDHVAGVAMGLILDSGKF
AVLTDILGDEDHLGDMDFKVAGTETGITALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMRDALEGSRTELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDETQAKEAQRRIVELTADVEVGQIYDGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQPVRVKVIEADDKGRLRLSIKAIGGIEQQQSGTAEPAAQSEPQAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgaccaagaccttccagtacggccagcattcggtcgtgttggaaacc
ggcgagatggctcgccaggcgtccggcgcggtgctggtgtccgtggaggacaccgtcgtg
ctggcaacggtcgtggcggccaagaaagccaaggccggccaggacttttttccgctgacc
gtcgactacatcgagaagacctacgccgccggccgcatcccgggcggtttcttcaagcgc
gaaggcaagccctccgaaaaggaaacgctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctataacgacgtgcaagtggtcatccacacgctgtcggtc
aatccggacatcgatcccgacattcccgccatgatcggcgcctcggccgcgctggccatc
tcgggcatcccgttcaacggccccatcggcgccgcccgcgtcggctatgtcgacggccag
tacgtgctcaaccccaccgcgacgcaactgaagtcgtccaagatggacctggtggtggcc
ggcaccgagaacgccgtgctgatggtcgaatccgaggcgaagcagctgtccgaggaaatc
atgctgggcggcgtggtgttcggccacgagcagatgcaggccgccatcaacgccatccat
gacctggtgcgcgatgccggcaagcccgactgggactggcaacccgcccccaagaacgaa
gcgctgatcgccgccgtgagcgccgccgcccaggaagggctgaacgccgcctaccagatc
cgcgaaaagcaggcccgcaccaccaagctgcgcgaagtctacgccgccgtgcaggcggcc
atggccgaacaggccgcgcaggctggccagcccgcgcccgacagcgtcggcgtggacaac
atcctgttcgacctggaagcgcgcatcgtgcgcagccagatcctcaacggcgagccgcgc
atcgacggccgcgacacccgcaccgtgcgtccgatcagcatccgcctgggcgtgctgccg
cgcgcgcacggcagcgcgctgttcacccgcggcgaaacgcaggcgctggtggtggccacg
ctgggcaccaagcaggatgagcagatcatcgacgccctgatgggcgagtaccgcgaccgc
ttcatgctgcactacaacatgccgccgttcgccaccggcgaaaccggccgcatcggcgtg
cccaagcgccgcgaaatcggccatggccgcctggccaagcgcgcgctgctgccgctgctg
ccggccccggaagacttccagtacaccatccgcctggtgtccgagatcaccgaatccaac
ggctcctcgtcgatggcctcggtgtgcggcggttcgctggccatgatggacgccggcgtg
cccaccaacgatcacgtggccggcgtggccatgggcctgatcctggacagcggcaagttc
gccgtgctgaccgacatcctgggcgacgaagaccacctgggcgacatggacttcaaggtg
gcgggtaccgaaaccggtatcacggcgctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggtcgcgctggcccaggcccgcgaaggccgcctgcacatcctcggc
aagatgcgcgacgcgctggaaggctcgcgtaccgagctgtcggcgttcgcgccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgtgcgctgaccgaggaaaccggcacgcagatcgatatctcggacgacggcaccatc
gtgatcgccagcgtggacgagacccaggccaaggaagcccagcgccgcatcgtcgaactg
accgctgacgtcgaagtgggccagatctacgacggctcggtgctgcgcctgctggatttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctccgagatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggttggccagccggtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtcgatcaaggcgatcggcggcatc
gagcagcagcagtccggtacggccgagccggccgcccagtcggagccgcaagccgaataa
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