KEGG   Alkalihalophilus pseudofirmus: BpOF4_03330
Entry
BpOF4_03330       CDS       T01165                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bpf  Alkalihalophilus pseudofirmus
Pathway
bpf03030  DNA replication
bpf03410  Base excision repair
bpf03420  Nucleotide excision repair
bpf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BpOF4_03330 (polA)
   03410 Base excision repair
    BpOF4_03330 (polA)
   03420 Nucleotide excision repair
    BpOF4_03330 (polA)
   03440 Homologous recombination
    BpOF4_03330 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpf03032]
    BpOF4_03330 (polA)
   03400 DNA repair and recombination proteins [BR:bpf03400]
    BpOF4_03330 (polA)
Enzymes [BR:bpf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BpOF4_03330 (polA)
DNA replication proteins [BR:bpf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BpOF4_03330 (polA)
DNA repair and recombination proteins [BR:bpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BpOF4_03330 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BpOF4_03330 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ADC48732
UniProt: D3FWX7
LinkDB
Position
complement(2936003..2938630)
AA seq 875 aa
MKKLILIDGNSIAYRAFFALPLLNNDKGVYTNAVYGFTTMLLKIIQEEKPTHMLVAFDAG
KTTFRHKTYEEYKGGRQKTPPELSEQFPLIRELLDAFNIKRFELDNYEADDIIGTLSKEA
EKEKWEVKVVSGDKDLLQLVSDYVTVVLTKKGITNVESYDEALIDEKYGIKPHQIIDMKG
LMGDSSDNIPGVPGVGEKTALKLLKQFGTIENVLDSVDDVSGKKLKEKLSENKEQALMSK
ELATIFTEVPYNLTLDELKFGEYDEEKVVSLFKELEFKSLVDQFDTGVSAAEKELEELSF
DVVEEVKEEHLATPAAMVVEVLDENYHQADIAGFALVHEKGRYFIPTETALRSDLFVEWA
KDETKKKWLLDAKRGVVVLGWKDVLLDGVDFDLLMASYLLDPSHSSHDLSDIATRKGAKS
IQADEAVYGKGAKRKVPETDVLAEHLVRKANVIYELKERMEEELKKNEQFELFKDLEMPL
SVVLGRMETEGVKVDIDQLKAMGEDLASRLAELEKHIHEHAGVSFNINSPKQLGEVLFEK
LGLPVIKKTKTGYSTSADVLEKLAEDHEIIRHILHYRQLGKLNSTYIEGLVKVTHKGTSK
IHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRKAFIPSEEGWKILAADYSQIELRV
LAHIAQDEKLITAFKEDMDVHTKTAMDVFHVSEEDVTSMMRRSAKAVNFGIVYGISDYGL
SQSLGITRKEAAKFIERYLASYPNVAEYMERIIEEARENGYVSTLLNRRRYLPELTSRNF
NQRSFAERTAMNTPIQGTAADIIKKAMVEMALRLEEANLKSRLLLQVHDELIFEVPPEEV
DEMMKIVPEVMENAVELAVPLKVDISAGDTWYDAK
NT seq 2628 nt   +upstreamnt  +downstreamnt
ttgaagaagctcatattaattgatggaaatagtattgcatatcgtgcattttttgccttg
ccgctgcttaataacgataaaggcgtttatacaaatgctgtgtatggatttactacgatg
ctgttaaaaattatccaagaagaaaaaccgactcatatgcttgttgcatttgacgctggt
aaaacgacgtttcgtcataaaacatatgaagaatataaaggaggacgtcaaaagactccg
ccggaactctctgagcagtttcctttaattcgtgagttattagatgcttttaatattaaa
aggttcgagcttgataattatgaagcagatgatattatcggtactcttagtaaggaagca
gaaaaagaaaagtgggaagtgaaagttgtttctggtgataaagacttgctgcagttagtc
tcggattacgtcacagtggtcctcactaaaaaaggaattacgaatgtcgagtcatatgat
gaagcgttgattgatgaaaaatatggtattaagccgcatcaaatcattgatatgaaagga
ctgatgggagatagttcagataatatccctggagtgcctggagtcggtgagaagactgcg
cttaaattactgaaacagtttggaacgattgagaacgtgttagattctgttgatgacgtt
tctggcaaaaagcttaaagaaaaactttcggaaaataaagaacaagcattgatgagtaaa
gagcttgcgaccatttttacagaagttccgtataaccttaccttagacgaacttaagttt
ggtgaatacgatgaagaaaaagtcgtgtcgctctttaaagagttggaatttaaatcgtta
gtggatcaatttgatacaggcgtgagtgctgcagagaaggagttagaggaattatctttt
gatgtagtggaagaggtaaaagaagaacatctcgcaacgccagctgctatggttgtagaa
gtattggatgaaaattatcatcaagcagatattgcagggtttgctcttgtacatgagaaa
ggccggtactttatcccgacagaaacggctcttcgttctgatttgtttgttgagtgggca
aaagatgaaaccaagaaaaagtggctgctagatgccaaacgtggtgtggtcgttttaggg
tggaaagatgtgctgttagatggagttgattttgacttgctgatggcgtcttatctgctt
gatccgtctcattcatctcatgacctaagtgacattgcgactcgaaaaggagccaaaagt
attcaagcggatgaagcggtgtatggaaaaggtgctaaacgaaaagtgcctgagacagac
gtgttggctgaacatttagtgagaaaagctaatgtcatttatgaactgaaagagcggatg
gaagaagaactgaagaaaaatgaacaatttgagctgtttaaagacttagaaatgccttta
tcggtcgtgcttgggcgcatggaaacagaaggtgtaaaagttgatatcgaccaattaaaa
gcaatgggtgaagatctagcaagcaggttagcggagcttgaaaaacatattcatgagcat
gctggggtgtcctttaatattaactcccctaagcagctaggggaagtgctgtttgagaag
ctcggtctgccggtcattaagaaaacaaaaacaggctattctacttcggctgatgttctt
gagaagcttgctgaagaccatgaaatcattcgtcatatccttcattaccgtcagcttggc
aaacttaactcgacctacattgaaggactagttaaagtgacacataagggtacgtctaaa
attcatacgcgatttaatcaagcactgacacaaacaggcagattaagctctacggacccg
aacttacaaaatatcccgatccgtttagaggaaggccgaaaaattagaaaagcgtttatt
ccgtctgaggaaggctggaagatccttgctgccgattattcgcaaattgaattgcgggtg
cttgcacatatcgcacaggatgaaaagctgattactgcctttaaagaagatatggatgtt
catacgaaaacggccatggatgtattccatgtaagtgaagaagatgttacttcaatgatg
cgcagaagtgctaaagcagttaacttcggaattgtatatggaattagtgattatggacta
tcacaaagcctggggattactcgtaaggaagcagcaaaatttattgagcgttatttagcg
agttatccgaatgtagcagaatatatggaacgaattatagaagaggcgagagaaaatggt
tatgtatctacattgcttaacagacgccgttatctccctgaattaacaagccgtaatttc
aatcagcgcagctttgctgagcgaaccgcaatgaatacacctattcaaggaaccgcagca
gatatcattaaaaaagccatggtcgagatggctcttcgtttagaagaggcaaacctaaag
agcagactgcttttgcaagtgcatgatgaactaatatttgaagtgccgcctgaagaggtg
gacgagatgatgaaaatagttcctgaagtgatggagaatgcagtagagctggctgttccc
ctaaaagttgatatatcagccggtgatacttggtatgatgcgaagtaa

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