Alkalihalophilus pseudofirmus: BpOF4_03330
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Entry
BpOF4_03330 CDS
T01165
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03030
DNA replication
bpf03410
Base excision repair
bpf03420
Nucleotide excision repair
bpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BpOF4_03330 (polA)
03410 Base excision repair
BpOF4_03330 (polA)
03420 Nucleotide excision repair
BpOF4_03330 (polA)
03440 Homologous recombination
BpOF4_03330 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpf03032
]
BpOF4_03330 (polA)
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_03330 (polA)
Enzymes [BR:
bpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BpOF4_03330 (polA)
DNA replication proteins [BR:
bpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BpOF4_03330 (polA)
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BpOF4_03330 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BpOF4_03330 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADC48732
UniProt:
D3FWX7
LinkDB
All DBs
Position
complement(2936003..2938630)
Genome browser
AA seq
875 aa
AA seq
DB search
MKKLILIDGNSIAYRAFFALPLLNNDKGVYTNAVYGFTTMLLKIIQEEKPTHMLVAFDAG
KTTFRHKTYEEYKGGRQKTPPELSEQFPLIRELLDAFNIKRFELDNYEADDIIGTLSKEA
EKEKWEVKVVSGDKDLLQLVSDYVTVVLTKKGITNVESYDEALIDEKYGIKPHQIIDMKG
LMGDSSDNIPGVPGVGEKTALKLLKQFGTIENVLDSVDDVSGKKLKEKLSENKEQALMSK
ELATIFTEVPYNLTLDELKFGEYDEEKVVSLFKELEFKSLVDQFDTGVSAAEKELEELSF
DVVEEVKEEHLATPAAMVVEVLDENYHQADIAGFALVHEKGRYFIPTETALRSDLFVEWA
KDETKKKWLLDAKRGVVVLGWKDVLLDGVDFDLLMASYLLDPSHSSHDLSDIATRKGAKS
IQADEAVYGKGAKRKVPETDVLAEHLVRKANVIYELKERMEEELKKNEQFELFKDLEMPL
SVVLGRMETEGVKVDIDQLKAMGEDLASRLAELEKHIHEHAGVSFNINSPKQLGEVLFEK
LGLPVIKKTKTGYSTSADVLEKLAEDHEIIRHILHYRQLGKLNSTYIEGLVKVTHKGTSK
IHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRKAFIPSEEGWKILAADYSQIELRV
LAHIAQDEKLITAFKEDMDVHTKTAMDVFHVSEEDVTSMMRRSAKAVNFGIVYGISDYGL
SQSLGITRKEAAKFIERYLASYPNVAEYMERIIEEARENGYVSTLLNRRRYLPELTSRNF
NQRSFAERTAMNTPIQGTAADIIKKAMVEMALRLEEANLKSRLLLQVHDELIFEVPPEEV
DEMMKIVPEVMENAVELAVPLKVDISAGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaagctcatattaattgatggaaatagtattgcatatcgtgcattttttgccttg
ccgctgcttaataacgataaaggcgtttatacaaatgctgtgtatggatttactacgatg
ctgttaaaaattatccaagaagaaaaaccgactcatatgcttgttgcatttgacgctggt
aaaacgacgtttcgtcataaaacatatgaagaatataaaggaggacgtcaaaagactccg
ccggaactctctgagcagtttcctttaattcgtgagttattagatgcttttaatattaaa
aggttcgagcttgataattatgaagcagatgatattatcggtactcttagtaaggaagca
gaaaaagaaaagtgggaagtgaaagttgtttctggtgataaagacttgctgcagttagtc
tcggattacgtcacagtggtcctcactaaaaaaggaattacgaatgtcgagtcatatgat
gaagcgttgattgatgaaaaatatggtattaagccgcatcaaatcattgatatgaaagga
ctgatgggagatagttcagataatatccctggagtgcctggagtcggtgagaagactgcg
cttaaattactgaaacagtttggaacgattgagaacgtgttagattctgttgatgacgtt
tctggcaaaaagcttaaagaaaaactttcggaaaataaagaacaagcattgatgagtaaa
gagcttgcgaccatttttacagaagttccgtataaccttaccttagacgaacttaagttt
ggtgaatacgatgaagaaaaagtcgtgtcgctctttaaagagttggaatttaaatcgtta
gtggatcaatttgatacaggcgtgagtgctgcagagaaggagttagaggaattatctttt
gatgtagtggaagaggtaaaagaagaacatctcgcaacgccagctgctatggttgtagaa
gtattggatgaaaattatcatcaagcagatattgcagggtttgctcttgtacatgagaaa
ggccggtactttatcccgacagaaacggctcttcgttctgatttgtttgttgagtgggca
aaagatgaaaccaagaaaaagtggctgctagatgccaaacgtggtgtggtcgttttaggg
tggaaagatgtgctgttagatggagttgattttgacttgctgatggcgtcttatctgctt
gatccgtctcattcatctcatgacctaagtgacattgcgactcgaaaaggagccaaaagt
attcaagcggatgaagcggtgtatggaaaaggtgctaaacgaaaagtgcctgagacagac
gtgttggctgaacatttagtgagaaaagctaatgtcatttatgaactgaaagagcggatg
gaagaagaactgaagaaaaatgaacaatttgagctgtttaaagacttagaaatgccttta
tcggtcgtgcttgggcgcatggaaacagaaggtgtaaaagttgatatcgaccaattaaaa
gcaatgggtgaagatctagcaagcaggttagcggagcttgaaaaacatattcatgagcat
gctggggtgtcctttaatattaactcccctaagcagctaggggaagtgctgtttgagaag
ctcggtctgccggtcattaagaaaacaaaaacaggctattctacttcggctgatgttctt
gagaagcttgctgaagaccatgaaatcattcgtcatatccttcattaccgtcagcttggc
aaacttaactcgacctacattgaaggactagttaaagtgacacataagggtacgtctaaa
attcatacgcgatttaatcaagcactgacacaaacaggcagattaagctctacggacccg
aacttacaaaatatcccgatccgtttagaggaaggccgaaaaattagaaaagcgtttatt
ccgtctgaggaaggctggaagatccttgctgccgattattcgcaaattgaattgcgggtg
cttgcacatatcgcacaggatgaaaagctgattactgcctttaaagaagatatggatgtt
catacgaaaacggccatggatgtattccatgtaagtgaagaagatgttacttcaatgatg
cgcagaagtgctaaagcagttaacttcggaattgtatatggaattagtgattatggacta
tcacaaagcctggggattactcgtaaggaagcagcaaaatttattgagcgttatttagcg
agttatccgaatgtagcagaatatatggaacgaattatagaagaggcgagagaaaatggt
tatgtatctacattgcttaacagacgccgttatctccctgaattaacaagccgtaatttc
aatcagcgcagctttgctgagcgaaccgcaatgaatacacctattcaaggaaccgcagca
gatatcattaaaaaagccatggtcgagatggctcttcgtttagaagaggcaaacctaaag
agcagactgcttttgcaagtgcatgatgaactaatatttgaagtgccgcctgaagaggtg
gacgagatgatgaaaatagttcctgaagtgatggagaatgcagtagagctggctgttccc
ctaaaagttgatatatcagccggtgatacttggtatgatgcgaagtaa
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