Bathycoccus prasinos: Bathy04g04130
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Entry
Bathy04g04130 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bathy04g04130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy04g04130
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Bathy04g04130
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Bathy04g04130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
19016439
NCBI-ProteinID:
XP_007513408
UniProt:
K8F351
LinkDB
All DBs
Position
4:complement(814252..820296)
Genome browser
AA seq
2014 aa
AA seq
DB search
MGEGVSKSSSPLANDIASRVASASSTAAALEELGYASAHTKASLKQILALLPRIDNKGLA
VLLATIAKTGDGSLGDVPSQTLADLASAMGLPPPTEAANRAKTWNIEAVADAVRETHPEL
DWRESVVVHLKDAILSLREKDPESEMFSSGFEVELSPDFESSLQQMNVAAGQGSFPPYYS
FFSRLVEMYRRGAGSPFPAQAIVGDGIVWPNELQSTQMKLLSAAVFAVEPSLMEWEFGVT
CFPPNGEKSEIKRWSCVDLMLVLTKLAENTTNNTKEVFLKPIAAKVLDRGASTNADYVVA
AISRAENAESSIASDVVEKSLTRIFSNFQNASAPREYALTAAFTHLPDAVIEAMSTSYES
NNACIPRIVDAISEMKNLAKVLQRIGQLASSNGSSAAKRSGMLMGVEIAALASRREYLNL
EKFLRDSLAGSSSGKNTNNSAGTSGNPDDFARACAAFLRRRCLESEGQSVKGLNVTSETA
KLFFECLESATSISAENKNDIKTVKNAYAQRGSSAGDASGMNADGTNPSGGNAGNTANAS
GNPGLSNGFPADIEAEANAHFQQVYAGQRKINDLVDMLGGFLRSNTPREREVFSCMVHNL
FDEYRFFPKYPDKELRITAVLFGQLVQRQLVSNITLGVALRCVLDALRKPFGSKMFAFGS
EALEQFKTRLPEWPQYCQHLAQIQHLRQAHPDLGQFFGNVPVSEPTQVALGMHEPEMGGP
EDARGLAAGVAGMKLSFNDIASAGNSAAAAAAASSAAAAATAASESAATSANATTATDMA
ASVLGIDSSSTKDGKLHSASSLPFFGKDGGDMSRSGSATAIASAPSGFATSLNLDTLLQA
STSTTASPDSKTADQIHFAVNNLSGENVKLKGQEVKGKLKPEFYEWFATYMVVKRAAIEP
NFHALYLEMLDEIGEEKLFEAILRATYHNIKVLLTSGKVKTNSGERSLLKNLGSWLGGLT
IARLQPVLMIDLDVKGLILDAYEAGRMIAVIPFVAKILEPAKDNYVFKPPNPWTAALLAL
LAEIYLDRDLKLNLKFETERLFKHFNLSVKDVKPSNLLQNRQRVRIDNPDFVADKVPAGL
SGLGPGGMLQTATSDGQLPSLQGQQRGGMGGGWGQQLSQQDMQQQQQQQQQRQQNMAAEQ
PSLSDAQALPNIQAHARVHPQPNVPESVRAMLARFLPIALTHGIREIVSPVVERSATIAC
VTSRELVRKDFACDPDTSRLRKAAHAMVSSLAGSLALATSREPLKASAANQLRLLVQRAG
ASNACEAQALENAIQNAVQDNLELGCSLIEKAATEKAMRDVDEALAPAVVVRRQHKETQQ
QQPSSISAPFYDSGVALSGKFPAALQLETLRPPRPGSATLMSGVALKVYDDFSRIPRLAP
PTPMGGSATSSQSNLAGASSGGSGPGGASGQQPPVPQSAFPGSQPPLPGAPPPPQPPLPG
GPPPPSEQSGTTSFLGGGKAGEDGDGRVSTGGVDDSNLTTAQKSAKEMRERVASHFDEWA
RVQDLPPGDDRSVMFLQRLERTTFLREDAQEGFLRVLVELAVTHCLGSEKKNQGGEESSM
SFAAVDAYCRLVTRLARRPEESPQQRLALFGRALVAIVRTAMRDTDERGPQFNPKPYFRA
LSGLLNEMRAPDAVLDSSHPQVLAAFASALLALQPMRVPGFAFAWLELVSHRCFMPRLLL
DHAQKGRPLLQRLICAALKFLEPYLRECNLTEPVKLLYKGVLRVFLVLLHDFPEFLCDNH
VFFLDATPTNCVQLRNLVLSAFPRNMRLPDPFTPNLKIDLLPEISQEPTNAAQFVLKDPA
FNQSNVKVTIDNYLSSKNIANASQVANQVRDDILLPGQKAMQTGTRYDVPMMNALVLYVG
VNAIVANQNARNSVLNSSSMELLQKLCDESLDAEGRYYFMSAVANQLRYPNSHTHYFSCV
TLCLFQETKSELVREQITRVLLERLVVNRPHPWGLLVTFVELIKNPRYNFWAHGFTRCAP
EIERLFESVARSCVKSPDEGGEAGQGQQQDGVAT
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaggcgtgtcgaaatcgtcttccccgttggcgaacgatatcgcctctcgcgtg
gcgtctgcgtcgtccacggctgcggcgttagaggaattgggctacgcctcggcgcatacg
aaagcttccttgaaacagatattggcgttgttaccgaggatcgataacaaaggattagcg
gtattattggcgacgattgcaaagaccggggatggctcgttaggggacgtgccgtcgcag
acgttggcggatttggcgtcggcgatgggtttgccgccgccgacggaggcggcgaatagg
gcgaaaacctggaacatcgaagccgtggcggacgcggtgagagagacgcatccggagttg
gattggagagagagcgttgtggtgcacttgaaagatgctattttgagtttgcgagagaaa
gatcccgagagcgagatgttttcgagcgggttcgaggtggagttgagtccggatttcgaa
tcgagtttgcagcaaatgaacgtcgccgccgggcaagggtcttttccgccgtattatagt
ttcttttctagattggtagagatgtatcgcagaggagcggggagcccatttcccgcgcaa
gctatcgtcggggatgggatcgtctggccgaacgagttgcaatcgacgcaaatgaaattg
ttgagcgcggcggtcttcgcggtggaaccgagtttgatggagtgggagtttggggtgacg
tgtttccctccgaatggagagaagagcgaaattaagcgttggtcttgcgttgatttgatg
ttagtgttgacaaagttagcagaaaataccacgaataatacgaaagaagtcttcttgaaa
ccaatcgcggcgaaagttttggatcgcggcgcgtcgacaaacgcggattacgtcgtggcg
gctatttcgcgcgcggaaaacgcggaatcttcgatcgcttcggatgtcgtcgagaagtcg
ttgacgaggatattctcaaactttcaaaacgcgtcggcgccgagggagtacgctttgacc
gccgcgtttacgcacttgccggacgcggttattgaagctatgagcacgagttacgaaagc
aacaacgcttgcatacctcgaatcgtggacgcgatttcggaaatgaagaatttagctaaa
gttctgcaaagaattggccagttggcgtcttcgaacggatcttctgcggcaaaacgaagt
gggatgttgatgggtgtcgaaatcgcggcgttggcgtcgcggcgcgaatacttaaatctc
gaaaagtttctgagagattctttagctggatcttcttcggggaagaatacgaacaatagc
gcgggaacttcaggaaatccagatgatttcgccagagcgtgcgcggcatttctgagaaga
cgctgcttggaatctgaaggacaaagcgtgaaaggattaaacgtaacttctgaaactgcg
aagctattctttgagtgtctggaaagcgcgacgtcgatttcggcggaaaacaaaaacgat
attaaaacggttaaaaatgcatacgctcagagaggatcttccgcgggcgacgcgagcggt
atgaatgcggatgggacgaacccgagcggcggcaacgccgggaatacggccaacgcgtcg
gggaatcctgggttgtccaacgggttccccgccgacatcgaagctgaagcgaacgcacac
tttcagcaagtgtacgccggtcaacgcaaaatcaacgatctcgttgacatgcttggcggg
tttttgcgatcgaacactccgcgcgaacgcgaagtgtttagttgcatggtgcacaatttg
ttcgacgagtatcgattctttccaaagtacccggacaaagagttacgaattaccgctgtg
ttgttcggtcagctcgtccagcgtcaactcgtgagtaacatcacgctcggtgttgcttta
cgttgcgtcttggacgctttgcgcaaaccgtttggatcgaagatgttcgcgttcggttcg
gaagcgttggaacagttcaaaactcgcttgccggaatggccgcaatattgccagcactta
gcgcagattcaacacttacgtcaagcgcatccggatttgggtcagttctttggaaatgtt
cccgtttcggagcctacgcaagtcgcgctcggcatgcacgaacctgagatgggcggcccg
gaggacgcgcgcggattagccgcgggagtggctggcatgaagttgagtttcaacgacata
gcttcggctggaaactccgcagcggccgcggcggcggcatcgtctgcagcagcggcagcg
acggcggcttcggagagtgcggcaacgagtgcgaacgcgacgacggcgacggacatggcg
gcatccgtgctcgggattgactcgtcttctacgaaagacggtaagttgcactcagcctcg
tcgttaccgtttttcggcaaagatggcggggatatgtcacgatcaggttcggctacggcg
attgcgtccgcgccttctggttttgcgacgtctcttaacttagatacgcttctgcaagct
tcaacctcgacgacggcttcgccggattcgaaaaccgcggatcagattcacttcgccgtg
aacaacttgtctggtgaaaacgtcaagttgaaagggcaagaagtcaaaggaaagctcaag
ccagaattttacgagtggttcgcgacgtacatggttgtgaagagagcggcgatcgagccg
aactttcacgcgttgtatctcgaaatgctcgacgaaattggcgaggaaaaattgttcgaa
gcgattcttcgcgcgacttatcacaacatcaaagttttgctgacgagcgggaaagtaaaa
acgaattcaggcgagcgctctttgttgaaaaatcttggttcatggctcggcggattaacg
atcgcgcgtctgcagccggtgttgatgattgatctcgacgtgaaaggattgattttagac
gcctacgaagctggacgcatgattgcagtcatcccatttgtcgcgaagatactcgaacct
gcgaaagataactacgtcttcaagcctccaaacccgtggacggcggcgcttttagcgttg
ttggcggaaatttacctcgatcgcgatttgaagttgaacttgaagtttgaaacggagaga
ttgtttaagcacttcaatttgagcgtcaaggacgtcaagccttcgaatttgttacagaat
cgacaacgcgtgcgcatcgacaatcctgatttcgtcgccgacaaagttcccgccggtttg
agtgggcttggtcctggaggtatgttgcaaactgccacgagcgacggtcaactcccgtcg
ttgcaagggcagcagcgcggcggcatgggtggcggctggggtcagcagctttctcaacaa
gacatgcagcagcagcaacaacaacaacagcaacgccagcagaatatggccgcggaacaa
ccgtcgttgtcggacgcgcaagctttgccgaacattcaagcgcacgcccgcgtgcatccg
caaccgaacgttccggagagtgttcgcgcgatgctcgcgcgatttttgccgattgcgttg
acgcacggcatacgggagattgtgtcgccggttgttgaacgctccgcaactattgcatgc
gtgacttccagagaactcgttcgtaaagatttcgcgtgcgatccagacacgtcgcgatta
cgtaaagctgcgcacgcgatggtttcttctttggctggatcgttagccttggcgacgtcg
agagagcctttgaaggcatccgcggcgaaccagttgcgattgctcgtgcaaagggcgggt
gcatccaacgcgtgcgaggcgcaagcgttggaaaatgccatccaaaacgcggtgcaagac
aacttggagctcggatgttcgttgattgaaaaagcagccacggaaaaagcgatgcgagac
gtcgacgaggcgctagcgccggcggtcgtggtcagaagacaacacaaagaaacccagcag
cagcaaccgtcatcgatttctgctccgttttacgatagtggtgttgctttatctgggaag
tttccggcggcgttacaattggagactttgcgtccgccgagacctggcagcgcgaccttg
atgagcggcgtcgctttgaaagtgtacgacgacttttctagaattccaagactcgcaccg
ccgacgccgatggggggaagcgcgacttcatcgcaatcgaatcttgccggagcttccagt
ggcggtagtggcccgggaggagcgagcgggcagcaaccgccggtaccgcaatccgcgttt
ccgggttcgcaaccgccgttacctggcgctccgccgccgccgcaaccaccgttaccgggt
ggtccgcctccgccgagcgagcaatcaggaacgacgagctttttgggtggtggcaaagct
ggcgaggatggcgatggtagagtgtcaactggcggggtcgacgacagcaacttgacgacg
gcgcaaaaatctgcgaaggagatgcgcgaacgagtcgccagtcactttgacgagtgggcg
agagtgcaagatttgcctcccggagacgaccgatccgtcatgttcttgcaaagactcgaa
cgaacgacgttccttcgcgaagatgcccaagaaggctttttgcgcgtcttggtcgaactc
gcggtgacgcattgccttggcagcgaaaagaaaaatcaaggcggcgaggaaagctccatg
agctttgcggcggttgacgcgtattgtcgtttagtcacgcgtctcgcgagacgcccggaa
gagtcaccgcagcaacgtttagcgctctttggacgcgcgttggttgccattgttcgcaca
gcgatgcgagatacggacgagcgaggtccgcagttcaatccgaaaccgtactttcgcgcg
ttgagcggcttgctcaacgaaatgagagcgccggatgcggtgttggactcgtcgcatccg
caagttttggctgcgtttgcttccgctttgttggcgttgcagcccatgcgcgttcctgga
tttgcgttcgcgtggttggaactcgtgtcgcatcgatgcttcatgccgagattactcttg
gaccacgcgcaaaaaggtcgtccgttgttgcaacgtttgatttgcgccgcgttgaagttt
ctcgaaccgtacttgcgcgagtgtaacttgaccgagccggtcaagttgctctacaaaggc
gtcttgagagtctttttggtgttgttgcacgatttcccggaatttctttgcgataaccac
gtgttcttcttggatgccacgccgacgaactgcgtccaactgcgtaacttggtcttgtct
gcgtttccaaggaacatgcgtttgccggatccgttcacgccaaacttgaagattgacttg
ttgccggaaatctcgcaagaaccgacgaacgcggctcaattcgtattgaaggatccagcg
tttaaccaatcgaacgtgaaagttaccatcgacaactatttgagctcgaagaacatcgcc
aacgcgtctcaagttgctaaccaggttcgcgacgacattttgcttcccgggcaaaaagcc
atgcaaaccggcacgcgatacgacgtcccgatgatgaacgctttagtgttatacgtcggc
gtcaacgcgatcgtggcgaaccaaaatgcgcgcaattccgtgttgaattccagttcgatg
gaattgttgcaaaaattgtgcgatgaaagtttagacgcggaaggtcgatactacttcatg
agcgccgtcgcgaaccagttgcgatatccaaactcgcacacgcactacttcagttgcgta
actttgtgcttattccaagagacgaaatcggaattagttcgagaacaaatcacgcgagtt
ttattggagcgattagttgttaacagaccgcacccgtggggattattagtcacgtttgtt
gagttgattaaaaatccgagatacaacttttgggcgcacggattcacgaggtgcgcgcct
gaaatcgaacgcttgttcgaatccgtcgcgagaagttgcgtcaagtctcccgacgaaggc
ggcgaagcagggcaaggacaacaacaagatggtgtggcgacgtaa
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integrated database retrieval system
