Bathycoccus prasinos: Bathy05g00330
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Entry
Bathy05g00330 CDS
T03089
Name
(RefSeq) Rad5p
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpg04121
]
Bathy05g00330
Enzymes [BR:
bpg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Bathy05g00330
Ubiquitin system [BR:
bpg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Bathy05g00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
Helicase_C
PHD
PHD_5
Gene66
Motif
Other DBs
NCBI-GeneID:
19015537
NCBI-ProteinID:
XP_007512947
UniProt:
K8EVM0
LinkDB
All DBs
Position
5:complement(59101..63690)
Genome browser
AA seq
1529 aa
AA seq
DB search
MKKRKKNIPRKRTKEDPSEPMVVQRDEERRGGMMMRKMLSSRGNVDFDDDDQQEEEMFVE
DDEEEEEEEEEDKEEDKEAEEEDNKNNEYNNNVVASSSSCYFKAKNININRMLKACKPNN
ANAPEFLGNLSHLLRPTLRPYQKRAVGWMMGRERAPNAPVGWENGKTQHADVEKLVTFKR
EEQLSALREMFKTTTTTTAKMTLIEANVVKKKHEEINLWMENVSKSMAMEDDGVRGGVLA
EEMGLGKTVELLMLCLAHKKPKDEKDEEKEEEKEEGKEEEDKVITNRDGMGFTTKLEKEE
KEEENEEMQQVRCVCGAMEDDPEYKGLWVSCEVCHKWSHAYCVGIKQNCTEAPDFICPHC
HAAKAGEKIPGISKTTLIVVPSTILQQWRDEVLKHVRRNDDDGKTDNKDNKFDILVYEGQ
PQTASLGSRAVHAKEVITSHKLAECDIVITTYDVLRAEINLDYATNADVNDGALRARRNA
TRRYPHIPPPLTKITWWRVIMDEAQMVGGGASAPSQMMERIPAVNRWCVTGTPLSSEKSH
MDDAFGLFKFLRARPFGHEMNFTTSHNWWQKIISAAMKTGYAGYGEFVLTESLKPIMWRN
AREDVIDELDLPPQNECVTELEFSPIEKHFYEKQHKNCAAEARNTYDRVKRSRNATNNND
DIELSRQDVTSIVLPLLRLRQACDHPQVGSYGISKWRRLKNIAAELVVDGDQSKKAEEKQ
KSKVLSMEEIHDRLVDKARLEAEEAQRLVAFSINAIAGLKWTQNDLASVIECYREVLRLD
ANANINGVRLDSFQRLHALHNLAEALQVVDKNKDIRIPRTLRDEKLLSDAETEKISYLAE
RVGGNVSIAANDFEKSRKIIDKKMKSLGRNEFWWMEALSYTTDAFVGKLLEQFDNRWQSS
KADWNTGAALKMVMQRDIDRLFECRNEAVADADRVTKIVEAADRQDVVEFASCSVCRKGM
EFAVVGVKCAVCKCDANFNKLQSVLFGVGRDATRNGKAKVKSSTRNVKDEDRRIYYDVTA
PSCAEKTLKALKSEVKGALEVQSYAKTHIEVIEEIRKEFTKIRALMHYQREKMYALDELS
MSTTRIRLRTPNEMVRIDGQDQLPEYLRASIVYPVEVPTLLKQHGDEKVTHEFEMKQTFG
QLRYLQTLKQKNKNERKKFDCPLCLETFDETKSKNAVIPKSALRKMKAGDDDDEDEDEED
EDINLHGAELAILPCGHELCVKCSFAYYGRPSNMVSKKKQFLHSLSPLPERHNNNNDNKR
GKCPTCRQECATKEISYVTWKSQDKDVRDNVEEAQKKREERLRKKAEESLHLSRIGADVS
KMLETLGAPETHARDESGIKIEGAWGTKIDAVVRRVKHLSKFDTNLKVLIFSEWEDVLMI
VDHALKMNGVNSIVPTSAASSSLKTKRAGSRFAVCVKEFVDSDSHSVSCLLLPLKRAGAG
LNLTCANHVILLEPSLDISAESQAIKRIDRIGQTKSTIIHRFVLKDSIEKNVMKVIENRR
SEGTVLPVDSKEASKLTARDIEELLKQQQ
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggaagaaaaatattcctcgaaagagaacgaaagaagacccatcggaaccg
atggtcgtgcaaagagacgaagagagaagaggagggatgatgatgaggaaaatgttgagc
agcagaggaaatgttgattttgatgacgacgaccaacaggaggaagaaatgtttgttgaa
gatgatgaagaagaagaagaagaagaagaagaagacaaagaagaagacaaagaagcggag
gaggaagataataagaacaacgagtataataataacgtcgtcgcttcttcttcgtcgtgt
tatttcaaagcgaaaaatataaacataaatcgaatgttgaaagcgtgcaagccaaacaac
gcgaacgctccggaatttttaggaaacctttcgcacctgttgcgaccgactttacgaccg
tatcagaagagagcggtgggttggatgatggggagagagagagcgccgaacgcgccagtt
gggtgggagaatgggaaaactcaacacgcggatgttgagaagttggtgacgtttaaaaga
gaggaacagttgagcgcgttgcgcgagatgtttaagacgacgacgacgacgacggcaaaa
atgacgttaatagaggcaaatgtggtgaaaaagaaacacgaggaaataaacttgtggatg
gaaaatgtgtcgaagtcgatggcaatggaagacgacggcgttcgcggaggcgtgttagcg
gaagaaatgggattaggtaaaactgtcgaacttttgatgttgtgtttggcgcacaagaaa
ccaaaagacgagaaagatgaggagaaggaggaggaaaaggaggaaggaaaagaagaagaa
gacaaagtgattacgaatcgagacggtatgggcttcacgacaaagctagaaaaagaggaa
aaagaagaagaaaacgaagaaatgcagcaagtgcgatgcgtctgcggtgcaatggaagac
gatccagagtataaaggtctttgggtatcgtgcgaagtttgtcacaaatggtcgcacgcg
tattgcgtcggcattaagcaaaactgcacagaggcgccggacttcatatgtccgcattgc
cacgccgcgaaagcgggggagaaaatcccgggcatttcaaaaacgacgctcatcgtcgtt
ccgtcgacgattttgcaacaatggcgagacgaggttttaaagcacgtccgtagaaacgac
gacgatggaaagaccgacaataaagacaataagtttgatattttggtatacgaaggacag
ccgcaaaccgcgagcttgggatccagagccgtacacgcgaaggaagtcattacctcgcat
aagctagccgaatgcgatattgttatcactacgtacgatgtgttgcgagctgaaatcaat
ctagattacgcgacaaacgcggatgtgaacgatggcgcactgcgcgctcgaaggaatgca
actcgaagataccctcacattcccccgcctttgacaaagataacgtggtggcgcgttatt
atggacgaagcacagatggtgggcggaggcgcctcggcgccgtcgcagatgatggagaga
attcccgcggtgaatcgttggtgcgtgactgggacgccgctatcatctgaaaagtcgcac
atggacgacgcgttcggattgttcaaattcttaagggcgcgtccattcggccacgagatg
aactttacaacatcgcataactggtggcagaaaataatcagcgcggctatgaaaacaggg
tacgcgggatacggcgagtttgtgctcaccgagagcctaaaaccaataatgtggcgcaac
gctagagaggacgttatagacgaactcgatttaccgccgcaaaatgagtgcgtcaccgaa
ttagagttttcgcccatcgaaaaacatttctacgaaaagcagcacaaaaactgcgccgca
gaagcgcgaaacacttacgatcgagtgaagcgatcgagaaatgctactaataacaacgat
gacatagagttatcgaggcaagacgtgacttctatcgtgctgcctctgctgagattgagg
caagcttgcgatcacccgcaggttggttcgtacggcatcagtaagtggaggcgtctgaaa
aatatcgcggcggaacttgtggtcgacggcgatcaatcaaaaaaagccgaggagaaacaa
aagagcaaagttctttccatggaagaaatccacgacaggttggtcgacaaagcgcgactt
gaagcagaggaagcgcaaagactcgtcgcgttttcaatcaacgccatcgctggattaaaa
tggacgcaaaacgatctcgcgagtgtcattgaatgttatcgcgaagttttacgcctcgat
gcaaacgcaaacatcaacggcgttcgtctcgatagtttccaaagattacacgctttgcac
aatttagccgaagctttgcaagtggtggataaaaacaaagacattcgaatacctagaacg
cttagagatgagaaattactcagcgacgccgaaacggaaaagatttcgtatttagccgag
cgagttgggggaaacgtatccatcgccgcgaacgatttcgaaaagtcgcggaaaattatc
gacaagaaaatgaaaagtctcggtcgaaatgaattttggtggatggaagccttgtcgtat
acgaccgacgctttcgtaggcaaactgctcgagcagtttgataaccgttggcaaagtagc
aaagcagattggaacaccggcgcggctctgaaaatggtcatgcaaagagacatagatcgc
ctattcgagtgtcgcaacgaagccgtcgcggatgctgatcgagtaacgaaaatcgtagaa
gccgcggatagacaagacgtggttgaatttgcctcgtgctcggtgtgcagaaaaggcatg
gaattcgcggtcgttggcgtgaaatgcgcggtgtgtaaatgcgatgcaaatttcaataaa
ttacaaagcgttttgtttggtgtcggtagagatgcgacgagaaacggtaaagcgaaagta
aaatcgtccacgagaaacgtcaaagatgaggacaggcgcatttattacgacgttactgcg
ccgtcgtgcgcggaaaaaactttgaaagcgctgaaaagcgaagtcaaaggagcactcgaa
gtgcaatcctacgcgaaaacgcacatcgaagtcatcgaagagattcgtaaagagttcacg
aaaatacgcgcgctgatgcactaccaacgcgaaaagatgtacgcactcgatgagttgagc
atgtcaacgacgcgtattcgattacgcacgcccaacgaaatggttcgaattgacggacaa
gaccaattgccggagtatttgcgcgcgtcgatcgtgtatccagtcgaggtacccaccttg
ctcaaacaacacggcgacgagaaagtcacgcacgaatttgaaatgaaacaaacgttcggt
caactgcgatatttgcaaacgctgaaacagaagaacaaaaacgagcgtaagaaatttgat
tgcccgttgtgtttagagacgttcgacgagacgaaatcgaagaatgccgtcattcccaag
agcgcgctgagaaaaatgaaagctggagatgacgacgacgaggacgaggacgaagaggac
gaagatattaatttacacggcgctgaacttgcaatcttaccgtgcggtcacgaattatgc
gtcaaatgttcgtttgcgtattacgggcgaccatccaatatggtttcaaagaagaaacag
ttcttacactcgttatcgccgctcccggagcgacacaataataacaacgacaacaagcgc
gggaaatgtccaacctgccgccaagagtgcgcgaccaaagaaatttcatacgtcacgtgg
aagtcgcaggataaggacgttcgcgataacgtcgaagaggcgcaaaagaagcgagaagag
agattgcggaagaaagcggaagagagtttacacctttcgcgaatcggcgcggacgtttcg
aaaatgctcgaaactttaggagcgccggaaacgcacgcgagagatgaaagcggtatcaaa
attgaaggcgcatggggtacgaaaatcgatgcggtggttcgtcgcgtgaaacatctgtcg
aagtttgatacgaacttgaaggttttaatcttcagcgaatgggaagatgttttgatgatt
gttgaccacgcgctgaaaatgaacggcgtgaattccatcgttccgacatccgctgcgagt
tcgtcactcaaaacgaaacgtgccgggagtagatttgcggtttgtgtcaaggaattcgtc
gacagcgactcgcattcggtcagttgtttgctgttgccgttgaaaagagctggagcagga
ctcaatttgacgtgcgccaaccacgtgattttgctcgagccgtcgctcgatatttccgcc
gagtcgcaagcgattaaaagaattgacagaatcggacaaacgaagtcaaccatcatacat
cggttcgtattaaaagattcgattgaaaagaacgtcatgaaagtcatcgagaatcgccgc
agtgaaggaacagttttacccgtggacagtaaagaggcgagtaaattgaccgcgcgagac
atcgaagagttgttgaaacaacaacagtaa
DBGET
integrated database retrieval system
