KEGG   Paraburkholderia phymatum: Bphy_1711
Entry
Bphy_1711         CDS       T00704                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bph  Paraburkholderia phymatum
Pathway
bph02024  Quorum sensing
bph03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bph00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bphy_1711
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Bphy_1711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bph03019]
    Bphy_1711
   03036 Chromosome and associated proteins [BR:bph03036]
    Bphy_1711
Messenger RNA biogenesis [BR:bph03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Bphy_1711
Chromosome and associated proteins [BR:bph03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Bphy_1711
SSDB
Motif
Pfam: Hfq LSM SelB_WH1 Hfq_1
Other DBs
NCBI-ProteinID: ACC70893
UniProt: B2JKR6
LinkDB
Position
1:1951214..1951666
AA seq 150 aa
MPSAESHPQNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRA
ISTIQLDTGSRPAPRAGRPSHGDHSARGPHGSREHREPREPRESYGGSQGSSDRSSSSSS
DGPVVVTRRRRLYGAGNGNDQGNNGGGHGE
NT seq 453 nt   +upstreamnt  +downstreamnt
atgccttccgcagaatcgcatccgcaaaacgactttatgaacgcagcgcgcaaagaacgt
aagcgcgtcgagatttatctcgtcaacggcatccgcctgacgggctgcatcgagtcgttc
gatcagtatctggtgatgctgcgtacgcccgtcgggctgcaaggcatctacaagcgcgcc
atttcgacgatccagctcgatacgggctcgcggcccgcgccccgcgcaggccggccgtcg
cacggcgaccattccgcacgcgggccgcatggttcgcgcgaacatcgcgagccgcgcgaa
cctcgtgagtcgtacggcgggtcgcaaggttcgtcggaccgttcgtcgtcttcgtcgtcg
gacggacctgtggtcgtcacgcgccgccggcgcctgtatggcgcgggcaacggcaacgac
cagggcaacaacggcggcggccacggcgaataa

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