Paraburkholderia phymatum: Bphy_1711
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Entry
Bphy_1711 CDS
T00704
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bph
Paraburkholderia phymatum
Pathway
bph02024
Quorum sensing
bph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bphy_1711
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphy_1711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bph03019
]
Bphy_1711
03036 Chromosome and associated proteins [BR:
bph03036
]
Bphy_1711
Messenger RNA biogenesis [BR:
bph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Bphy_1711
Chromosome and associated proteins [BR:
bph03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Bphy_1711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
SelB_WH1
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ACC70893
UniProt:
B2JKR6
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All DBs
Position
1:1951214..1951666
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AA seq
150 aa
AA seq
DB search
MPSAESHPQNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRA
ISTIQLDTGSRPAPRAGRPSHGDHSARGPHGSREHREPREPRESYGGSQGSSDRSSSSSS
DGPVVVTRRRRLYGAGNGNDQGNNGGGHGE
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgcagaatcgcatccgcaaaacgactttatgaacgcagcgcgcaaagaacgt
aagcgcgtcgagatttatctcgtcaacggcatccgcctgacgggctgcatcgagtcgttc
gatcagtatctggtgatgctgcgtacgcccgtcgggctgcaaggcatctacaagcgcgcc
atttcgacgatccagctcgatacgggctcgcggcccgcgccccgcgcaggccggccgtcg
cacggcgaccattccgcacgcgggccgcatggttcgcgcgaacatcgcgagccgcgcgaa
cctcgtgagtcgtacggcgggtcgcaaggttcgtcggaccgttcgtcgtcttcgtcgtcg
gacggacctgtggtcgtcacgcgccgccggcgcctgtatggcgcgggcaacggcaacgac
cagggcaacaacggcggcggccacggcgaataa
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