Paraburkholderia phymatum: Bphy_6283
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Entry
Bphy_6283 CDS
T00704
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph00460
Cyanoamino acid metabolism
bph00630
Glyoxylate and dicarboxylate metabolism
bph00670
One carbon pool by folate
bph00680
Methane metabolism
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
bph01120
Microbial metabolism in diverse environments
bph01200
Carbon metabolism
bph01230
Biosynthesis of amino acids
bph01240
Biosynthesis of cofactors
Module
bph_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphy_6283
09102 Energy metabolism
00680 Methane metabolism
Bphy_6283
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_6283
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphy_6283
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphy_6283
Enzymes [BR:
bph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphy_6283
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACC75317
UniProt:
B2JWJ0
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All DBs
Position
pBPHY01:complement(848557..849816)
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AA seq
419 aa
AA seq
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MFSKEQTIAGFDPELSAAMLGERQRQEDHIELIASENYASPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVVESLAIERARQLFGAGYANVQPHSGSQANAAVYLALLAPGDAMLGMS
LAHGGHLTHGAKVSFSGKVFNAVQYGVDAATGLIDYDDVARLALEHRPKMIVAGFSAYSR
VLDFARFRQIADSVGAFLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLI
LARANEAIEKKLSAMVFPGTQGGPLMHVIAAKAVAFKEALGAEFVAYQKQTLNNARAMVG
VFIEHGYKVVSGGTDDHLFLVDLVDKGITGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GIRIGTPAITTRGFDENDARLTASLVCDVLDSIGDERTETHVRDQVARLCARLPVYRGL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaagaacagacgatcgcgggcttcgatcccgaactgtcggccgcgatgctg
ggcgagcgtcaacgacaggaagatcacatcgagctgatcgcgtcggaaaactatgcgagt
ccgcgcgtgctcgaagcgcagggttccgtgctgaccaacaagtatgcggaagggtatccg
ggcaagcgctattacggcggatgcgagcatgtggacgtggtcgaatcgctggccatcgag
cgggccaggcagctgttcggcgctgggtacgccaacgttcagccgcatagcggatcgcag
gcgaacgcggccgtctatctcgcgctgctcgcgcccggcgacgccatgcttggcatgagc
ctcgcgcacggcggccacctgacgcacggcgcgaaggtgtcattttcgggcaaggtgttc
aacgcggttcagtatggcgtcgacgcggcgacgggactgatcgactacgacgacgtcgcg
cggctcgcgctcgaacatcgaccgaagatgatcgtggccggcttctcagcgtattcgcgc
gtgctcgacttcgcgcgctttcgccagatcgccgacagcgtcggcgcatttctgttcgtc
gatatggcgcatgtggccggtctcgttgcggcaggtctctacccgaatccagttccattt
gcggacgtcgtgacgacgaccacgcacaagacgctgcgcggtccgcggggcggtctgatc
ctcgcgcgcgccaacgaagcgatcgaaaagaagctcagcgcgatggtctttccaggcacg
caaggcggcccgctgatgcatgtgatcgcggcgaaagcggtggcgttcaaggaagcgctc
ggcgcggaattcgtcgcgtaccagaagcagacgctgaacaatgcgcgcgcgatggtgggc
gttttcatcgagcacggctacaaggtggtgtcgggcggcacggacgatcacctcttcctc
gtggatctcgtcgataaagggatcacgggcaaggacgcggacgcggcgctcggccgcgcg
cacatcacggtgaacaagaacgcggtgccgaacgacccgcagtcgccgttcgtgacgagc
ggcattcggatcggcacgccggccatcacgacgcgcggattcgatgagaacgatgcaagg
ctgacggcgtcgctcgtctgcgatgtgctcgacagtatcggcgatgagcggacggagaca
cacgtgcgcgaccaggtcgcgcgactgtgcgcgcgattgcccgtgtacagagggctgtga
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