Battus philenor (pipe-vine swallowtail): 137926672
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Entry
137926672 CDS
T10485
Symbol
Upf3
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013
Nucleocytoplasmic transport
bphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137926672 (Upf3)
03015 mRNA surveillance pathway
137926672 (Upf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137926672 (Upf3)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137926672 (Upf3)
mRNA cycle factors
P-body specific factors
137926672 (Upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
137926672
NCBI-ProteinID:
XP_068626446
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MTEDQDAKDSQSDSGSKTFVNKNRDSKKPKTQRPLTKIIFRRLPPTMTEEAFLDQVSPIP
DHDYFYFARPDPSLGTNVYSRAYINFVNVDDIYLFRDKFDGYIFVDEKGLEYVGIVEYAP
FQRIPKKKKKKDPKCGTIESDPIFQDFIDNLSKEPETENQPKLEYSYPVNDSNDKKNQST
PLLEYLAARKQDKRGRDERRRRENDKRKMRVERKCKDGSIKEDEVVDNDIKKIKSREWEK
DKPVTETKDDSVKQEIRDGTVFESRTYREQRKIGTNAIIDKKKKMDGDKKEFNVKDEDLY
EDSDKSFKKDKRDKFKESPREQKSKKYSDTRKERINKTEFVKTEKQSVISKMLSSSENKC
KSHNYDDIKPFTQLPQVKTDDLTRVVDGFDKKIKLDETQQESKKESSDGNESSVASNVRR
NSFDSNTISMKDSILKRQKSLDDRGKSTDREESEEADKSESNERRAERRIRNKDRPSLVI
YQPGMGKFSKQRLAKEIQPATTTKSMNDGEKKDT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaccaagatgctaaagattcccagtcggactcgggcagcaaaacatttgtg
aataaaaatagagacagcaaaaaacccaaaacccaacggcctttgactaaaataatattt
cggcggttacctcctacaatgactgaagaagcatttttggatcaagtgtcccccatacca
gatcatgattatttctattttgccaggcccgatccgtctcttggcactaatgtgtattcc
agagcatatataaattttgtgaatgtcgatgatatttatttgtttagggacaagtttgat
gggtatatttttgtggatgagaaagggcttgaatatgtgggaattgttgagtatgctcca
tttcaaagaatacctaaaaaaaagaagaagaaagaccctaaatgtggaacaatagaaagt
gacccaattttccaggattttattgacaatctgagtaaagaaccagaaactgagaatcaa
cctaaacttgaatattcatatccagtaaatgatagtaatgataaaaaaaaccagtctaca
cctttgctggaatatctagctgctaggaaacaggacaagagaggtagagatgagagacgc
aggagagaaaatgataaaagaaaaatgagagtagaaaggaaatgtaaagatggttcaatt
aaggaagatgaggtagttgataatgacatcaagaaaattaaatccagagagtgggaaaag
gataaaccagtaacagagactaaagatgattctgtaaaacaagaaatcagagatgggact
gtgtttgaatcaagaacatatagggaacaacgtaaaattggtactaatgcaattatagac
aaaaagaaaaaaatggatggtgacaaaaaagaatttaatgtaaaagatgaagacctttat
gaagattctgataaaagtttcaaaaaagataagagggacaaatttaaagagtctcctcgg
gaacagaaaagtaaaaagtacagtgatacaagaaaggaaagaattaataaaactgaattt
gtcaaaactgaaaaacagtcagtcatcagtaaaatgttatcatcatcagagaacaaatgt
aaatcacataattatgatgacatcaaaccttttacccaacttcctcaagtgaaaactgat
gatttgaccagggtggttgatggttttgataagaaaattaagctagatgaaactcaacaa
gagtcaaagaaagagtctagtgatggcaatgagagttctgttgcatcaaatgtgagacgt
aacagttttgattccaatactatttctatgaaagactccattctgaaacgtcaaaaatct
cttgacgacagaggtaaatcaactgacagagaagaatcagaggaagcagacaaaagcgag
agtaatgagcgtcgtgctgagaggagaattagaaataaggatcgcccaagccttgttatt
tatcaaccaggaatgggtaagttcagcaaacaacgactcgcaaaagaaatacagccagca
accactacaaaatcgatgaacgatggtgaaaagaaagacacttga
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