Blattabacterium sp. BPLAN (Periplaneta americana): BPLAN_456
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Entry
BPLAN_456 CDS
T00996
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpi
Blattabacterium sp. BPLAN (Periplaneta americana)
Pathway
bpi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BPLAN_456 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpi03021
]
BPLAN_456 (rpoB)
03400 DNA repair and recombination proteins [BR:
bpi03400
]
BPLAN_456 (rpoB)
Enzymes [BR:
bpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BPLAN_456 (rpoB)
Transcription machinery [BR:
bpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BPLAN_456 (rpoB)
DNA repair and recombination proteins [BR:
bpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BPLAN_456 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
NitrOD1
Motif
Other DBs
NCBI-ProteinID:
ACX84069
LinkDB
All DBs
Position
complement(470648..474466)
Genome browser
AA seq
1272 aa
AA seq
DB search
MNTENVSERITFASVAKQVEYPDFLDIQIKSFKEFFQLDTKPENRKNEGLFKAFTENFPI
SDARNSFVLEFKGYSIDTPRYSIEECIERGLTYSVPLKAKLKLYCTDPEHEDFETVYQDV
YLGTYPYMTPSGSFIFNGAERVIVSQLHRSPGVFFGQSHHANGTKLYSARIIPFKGSWIE
FATDINNVMYAYIDRKKKLPMTTLLRAIGYERDKDILEIFDLAEEVKITETEDTKSILSR
SLAARILNIWHEDFVDEDTGEVISVEKNEVLIDRDVSITQEHIDLMIQHEIKTILLHKKE
GKKKDYSIIYNTLQKDPTNSEKEAVEYIYRQLRNTEPPDEETARGVIDKLFFSDTRYSLG
PVGRYRLNKRLGLNINPDYLVLTKEDIIAIVEHLNALFNSKREVDDIDHLSNRRVRTVGE
QLYAQFSIGLARMARTIRERMNVRDNEVFMPVDLINAKTLSSVINTFFGTNQLSQFMDQT
NPLSELTHKRRLSALGPGGLSRERAGFEVRDVNYSHYGRLCPIETPEGPNIGLISSLSVF
AKINDMGFVETPYQSIHDGKVDLKSKVKYLSAEEEEGKIIAQANAIDQYGNFISDRIIAR
EDGDFPIVTPKKVDYIDVAPNQIASISASLIPFLEHDDANRALMGSNMMRQAVPLLKPEA
PIVGTGLEKQVARDSRILINAESNGLVEYLDARKIIIRYEKTEREALVSFEPKVKTYDLI
KFRKTNQNTCITLKPIVKMGMKVVKGQILCEGYATENGELALGRNLRAAFIPCNGYNFED
AVLISEKVVSEDWFTSIHIDEYSLDVRDTKLGMEELTNDIPNVSEEATKDLDENGIIRVG
AEVRPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGNVKDASLRAEPSLFGVVIDTKLF
TRSIKDKKSRVQDKIQLERIEKKYEKKFSDLRNQLLQKLHTVLHGKISKKIIINEKKQEI
IEEGTKFTAKLLNKISDYIEITPGDWTFDVETNNLVSEILHNYQISVNDLNSMLKHKKFS
ITVGDELPSGIIKMAKVYIAKKRKLKVGDKMAGRHGNKGVVARILREEDMPFLEDGSPVD
IVLNPLGVPSRMNIGQIYETVLGWAGYKLNIKFSTPIFDGATIEKISEFTDKANIPRFGT
TYLFDGGTGERFDQPATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQR
FGEMEVWALEAFGASNILREILTVKSDDVTGRAKTYESIVKGDPMPEPNNPESFNVLCYE
LKGLGLDINLEE
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacagaaaatgtctcagaaagaataacttttgcctcagtggcaaaacaagtagag
tatcctgactttttggatattcaaataaaatcatttaaagaattttttcaattagataca
aaaccagaaaatagaaaaaatgaaggtttatttaaagcttttacagagaattttcctatt
tctgatgcgaggaattccttcgttttagaattcaaaggatactctatcgatactcccaga
tattctatagaagaatgcattgaaaggggattaacttatagtgttcctttaaaagcaaaa
ttaaaattatattgtacagaccccgaacatgaggattttgagactgtatatcaagatgtc
tatttagggacttatccgtatatgactccttctggttcttttatattcaatggagcagaa
cgtgtgatagtctctcaattgcatcgttctcctggagtattttttggacaatctcatcat
gctaatggaacgaagttatattccgcaagaataattccttttaaaggatcttggattgaa
tttgctacggatataaacaatgtaatgtatgcctatatagacagaaaaaaaaaattaccc
atgactactttacttcgtgctattggatatgaaagagataaagatatattagaaatattt
gatttagcagaagaagtaaaaataacagaaacagaagacacaaaatctattttatcaaga
tctttggcagctagaatattgaatatttggcatgaagattttgtagatgaagatacagga
gaggtgatttctgtagagaaaaatgaagttttgatagatagagatgtctccataacacaa
gagcatattgatttgatgatccaacatgagataaaaacaattttattgcataaaaaggaa
ggaaagaagaaagattattctatcatttataacactttgcaaaaagatcccactaattct
gaaaaagaggctgtagaatatatatatagacagcttagaaatacagaacctccagatgaa
gaaacggctagaggagttatagataagctttttttttctgatactagatacagtttagga
cctgtggggaggtatcgtttgaataaacgtcttggattaaatattaatccggattatcta
gttttaactaaagaagatattattgctatagttgaacatttgaatgcattattcaattct
aaaagagaagtggatgatatcgatcatttatctaatagacgtgtaagaactgtaggagaa
cagctttatgcccaatttagtatcggtttggcaagaatggctagaacaataagagaacgg
atgaatgttcgggataatgaagtttttatgccggtagatcttattaatgcaaaaacttta
tcttccgttataaatactttttttggaactaatcaattatcccaatttatggatcagaca
aatccattatctgaacttactcataagagaagattgtctgctttaggtcctggagggtta
tccagagaaagggctggatttgaggtgagagacgtaaattattctcattatggaagatta
tgtcccattgaaactccagaaggtccaaatattggtttaatttcttctctttctgttttt
gcaaagattaatgatatggggtttgtagaaactccttatcaatctattcatgatggaaaa
gtagatttaaaatctaaggttaaatatttaagtgcagaagaagaagaaggaaaaatcata
gcacaagctaatgcaatagatcaatatggaaattttatttctgatagaatcatagctcgt
gaagatggagattttcctatagtcactccaaaaaaagtggattatatagatgtagctcct
aatcaaatcgcttctatatctgcttctttaattccttttttggaacatgatgatgcgaat
agagctctcatgggttctaatatgatgcgtcaagctgttcccctattaaaacctgaagcc
ccaattgtaggaactggattagaaaaacaggtagccagagattctcgtattttaattaat
gcagaaagcaatggattagtggaatatcttgatgcaagaaaaataattatacgttatgaa
aaaacggaaagagaagctttggtcagttttgaacctaaagtgaaaacttatgatttgatt
aaatttagaaaaactaatcaaaatacatgtattactttaaaacctattgttaagatggga
atgaaagtagtaaaaggacagattttatgtgaaggatatgctactgaaaatggagaatta
gctttaggaagaaatttaagagctgcttttattccatgtaatgggtataattttgaagat
gccgttttaatttcagaaaaagtagtaagtgaagattggtttacttctatacatatagat
gagtattctctagatgtacgtgacacaaaattaggaatggaagaattaacaaatgatatt
ccaaatgttagtgaagaagctactaaagatttggatgagaatggaattatacgagtaggt
gcggaagtaagacctggtgatattttgattggaaaaatcacccctaaaggagaatctgat
cctactccagaagaaaaattattgagagctatttttggagataaagctggaaatgtaaaa
gatgcttctttaagagcagaaccttctttatttggagtggtgatagatacgaaattattt
actcgtagtataaaagataaaaaatctagagttcaggataaaatacagctagagcgcata
gaaaaaaaatatgagaagaaattttctgatttaagaaatcaattattgcaaaaattgcat
accgttttacatggaaaaatttctaagaaaattattattaatgaaaaaaaacaggaaatt
atagaagaaggaactaaattcactgcgaaattacttaataaaatatctgattatatagaa
attactccgggagattggacttttgatgtagaaactaataatcttgtatcggaaatactg
cataattatcaaatttctgttaatgatttaaatagtatgttgaaacacaaaaaattttct
attacagttggagatgaattgccttctgggattattaaaatggctaaagtttatattgca
aaaaaaagaaaattgaaagttggagataaaatggctggtagacatggaaataaaggagta
gtggctcgtattcttcgcgaggaagatatgccttttttagaagacggaagtcctgtagat
atagttttaaatccattaggagttccctctagaatgaatattggacaaatatatgagact
gtattaggttgggctggttacaagttaaatattaaattttcaactcctatatttgatgga
gctactatagaaaaaatatctgaatttacagataaagctaatattcctcgtttcggaact
acttatttgtttgatggagggacaggagagagatttgatcaaccagcaacagtaggggta
atatacatgttaaaactaggtcatatggttgatgataaaatgcatgctcgttctataggt
ccatattctcttatcacccaacaacctctaggaggaaaggctcagtttggaggacagcgt
tttggagaaatggaagtttgggctttagaagcttttggagcttctaatattttgcgtgaa
atattaactgttaaatctgatgatgtaacaggaagagctaaaacttatgaatctatagtg
aaaggggaccccatgcctgaacccaataatccagaatcttttaatgttttatgttatgaa
ttaaaaggacttggactggatattaatttagaagaatga
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integrated database retrieval system
