Burkholderia plantarii ATCC 43733: bpln_1g02390
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Entry
bpln_1g02390 CDS
T04139
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bpln_1g02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpla03021
]
bpln_1g02390
03400 DNA repair and recombination proteins [BR:
bpla03400
]
bpln_1g02390
Enzymes [BR:
bpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bpln_1g02390
Transcription machinery [BR:
bpla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bpln_1g02390
DNA repair and recombination proteins [BR:
bpla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bpln_1g02390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
UbiD
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
ALK29070
LinkDB
All DBs
Position
1:299106..303215
Genome browser
AA seq
1369 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQAEVSAAQRKSEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQMEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEVTESVLDKLREAKIKDIQTIYTNDLDQGPYISSTLRVD
ETADKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVSRDEI
VGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
TDSKVTDQIDYLSAIEEGRYVIAQANASVDEASGELTDELVSAREAGETMMVTPDRIQYM
DVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSG
TTVQAERGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKM
GDKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHI
EELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGET
QLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIVRDKRAQQIIDDEL
KRYRLDLNDQLRIVEGDAFQRLARMLDGKVANGGPKKLAKGTKIDQAYLSDLDHYHWFDI
RLADEEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRL
QPGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWA
AKGLGWRIGEMLARQTKIEELRVFLTKIYNESGRAEDLDSFSDDEILELARNLREGVPFA
TPVFDGATEEEMSKMLDLAFPDEIAQQLGMTPSKNQVRLYDGRTGEAFERTVTVGYMHYL
KLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTV
KSDDVNGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgtattcgcaagagtttcgcgaagcgctccatc
gttcaccaagttcctttcctgctagccactcagcttgaatcattcagcacgtttctgcaa
gctgaagtgtcggcagcgcaacgtaagtccgaaggcttgcaagccgccttcacctccgtg
ttcccgatcgtctcgcacaacggttttgctcgcctcgaattcgtgagctatgcgttgtcg
tcgccggcattcaacatcaaggaatgccagcagcgaggcctcacctattgctccgccctg
cgcgccaaggtgcgcctggtgctgctcgacaaggaatcgccgagcaagccggtcgtcaag
gaagtgaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgaccggctcg
ttcgtcatcaatggtaccgagcgcgtgatcgtgtcgcagctccaccgttcgccgggcgtg
ttcttcgagcacgacaagggcaagacgcacagctccggcaagctgctgttctcggcacgg
atcatcccctaccgcggttcgtggctcgacttcgaattcgatccgaaggacgtgctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggccatcggcctg
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcacgctgatggacgaa
ggcgcacagatggaattcgtgcccgagcgtctgcgtggcgaagtcgcgcgcttcgacatc
accgatcgtgatggcaaggtcattgtccagaaggacaagcgcatcaacgcgaagcacatc
cgcgatctcgaggccgcgaagacgaagttcatctcggtgccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtggacggcgacaccggcgaagtgatcgcgaacgcgaac
gacgaggtcacggaaagcgtactcgacaagctgcgcgaggcgaagatcaaggacatccag
acgatctacacgaacgatctggaccaggggccgtacatctcctcgacgctgcgcgtcgac
gaaacggccgacaagacggccgcgcgcatcgcgatctaccgcatgatgcgtccgggcgag
ccgccgacggaagaagccgtcgaggcgctgttcaaccgcctgttctacagcgaagacgcc
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtgagccgtgacgagatc
gtcggcccgatgacgctgcaggacgacgacatcctcgccaccatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgatcacctcggcaaccgtcgcgtgcgt
tgcgtcggcgaactggcggagaaccagttccgtgccggcctggtgcgtgtcgagcgcgcg
gtgaaggaacgcctcggccaggccgagagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctctcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgcgtttccgcactcggg
ccgggcggtctgacgcgcgagcgcgcgggcttcgaagtccgcgacgtgcatccgacccac
tatggccgcgtgtgcccgatcgagacgccggaaggtccgaacatcggcctgatcaactcg
ctggcgctgtacgcgcacctgaacgagtacggtttcctcgagacgccgtaccgcaaggtc
acagacagcaaggtgaccgaccagatcgactacctgtcggcgatcgaggaaggccgctac
gtgatcgcgcaggcgaacgcgtcggtggacgaagcctcgggcgagctgaccgacgaactg
gtgtcggcgcgtgaagccggcgaaaccatgatggtcacgccggaccgcatccagtacatg
gacgtggcgccgtcgcagatcgtctcggtggccgcctcgctgatcccgttcctcgagcac
gatgacgcgaaccgcgcgttgatgggctcgaacatgcagcgtcaggccgtgccttgcctg
cgtccggaaaagccggtcgtcggtaccggcatcgagcgcacctgcgcggtcgactccggc
accacggtgcaggctgagcgtggcggcgtggtcgactacgtcgacgccggccgtatcgtg
attcgcgtgaacgatgacgaagccgtggccggtgaggttggcgtcgacatctacaacctg
atcaagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatg
ggcgacaaggtctcgcgcggcgacgtgctggccgacggcgcctcgacggacctgggcgag
ctcgcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgag
gattcgatcctgatctcggagaaggtggtggccgacgatcgctacacgtcgatccacatc
gaagagctgaacgtggtcgctcgcgacacgaagctcgggccggaagaaatcacgcgcgac
atctcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtctacatc
ggcgccgaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgagacc
cagctgacgccggaagagaagctgttgcgcgcgatcttcggcgaaaaggcctcggacgtg
aaggacacctcgctgcgcgtgccgtcgggcatgagcggcacggtgatcgacgtgcaggtg
ttcacgcgcgaaggcatcgtgcgtgacaagcgcgcgcaacagatcatcgacgatgaactg
aagcgctatcgcctcgacctgaacgatcagctgcgcatcgtggaaggcgacgcgttccag
cgtctggcgcgcatgctcgacggcaaggtcgccaacggcggtccgaagaagctcgccaag
ggcaccaagatcgaccaggcctacctgtcggatctcgaccactatcactggttcgacatc
cgtctggccgacgaggaagcggcggcccagctcgaagcgatcaagaactcgatcgaagag
aagcgccaccagttcgacctcgcgttcgaagagaaacgcaagaagctcacgcagggcgat
gaactgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtcaagcgtcgcctg
cagccgggcgacaagatggcgggtcgccacggtaacaagggcgtggtgtcgaagatcgtt
ccggtcgaagacatgccgtacatggccgacggccgtccggccgacgtcgtgctgaacccg
ctcggcgtgccgtcgcggatgaacgtgggtcaggtgctcgaagtgcatctgggctgggcc
gcgaagggtctcggctggcggatcggcgaaatgctggcgcgccagaccaagatcgaggaa
ctgcgcgtgttcctgaccaagatctacaacgagtcgggtcgcgcggaagacctggacagc
ttcagcgacgacgagatcctcgaactcgcgcgcaacctgcgcgagggtgtgccgttcgcg
acgccggtgttcgacggcgcgaccgaggaagaaatgtcgaagatgctcgatctggcgttc
ccggacgagatcgcgcagcagctcggcatgacgccgtcgaagaatcaggttcgcctgtac
gacggccgcaccggcgaggcgttcgagcggaccgtgacggtcggctacatgcactacctg
aagctgcaccacttggtcgacgacaagatgcacgcgcgttcgaccggcccgtactcgctc
gtcacgcagcagccgctgggtggtaaggcgcagttcggcggccagcgtttcggggaaatg
gaagtgtgggcgctcgaagcgtacggcgcatcgtacgtgctgcaggaaatgctgacggtg
aagtcggacgacgtgaacggccggaccaaggtgtacgagaacctcgtcaagggcgaccac
gtgatcgacgcgggcatgccggaatccttcaacgtgttggtgaaggaaatccgctcgctc
ggtatcgacatcgacctcgaccgcaactaa
DBGET
integrated database retrieval system
