Butyrate-producing bacterium SS3/4: CK3_01490
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Entry
CK3_01490 CDS
T02611
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bprs
Butyrate-producing bacterium SS3/4
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprs03032
]
CK3_01490
03036 Chromosome and associated proteins [BR:
bprs03036
]
CK3_01490
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_01490
DNA replication proteins [BR:
bprs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CK3_01490
Chromosome and associated proteins [BR:
bprs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CK3_01490
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CK3_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HYPK_UBA
HU-DNA_bdg
HU-CCDC81_euk_2
DUF2267
TFIIB
Motif
Other DBs
NCBI-ProteinID:
CBL40022
UniProt:
D7GQE7
LinkDB
All DBs
Position
151698..151973
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AA seq
91 aa
AA seq
DB search
MNKTELIAAVAEQAELSKKDAEKALKAFTDVIAAELVKGEKVQLVGFGTFEVSEREAREG
RNPLTGEKITIAASKNPKFKAGKALKDMVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagaattaatcgcagcagttgctgagcaggcagaactctccaagaaagat
gctgagaaggcactgaaggctttcacagatgttattgcagcagagttagttaaaggtgag
aaggtacagttagttggcttcggtacattcgaggtatccgagagagaggctagagaggga
agaaacccgcttacaggcgagaagatcacgatcgcagcttccaagaacccgaaattcaaa
gctggtaaggctttaaaggatatggttaacgcttaa
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