Brucella pseudintermedia: NIK97_03955
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Entry
NIK97_03955 CDS
T08522
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpsn
Brucella pseudintermedia
Pathway
bpsn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpsn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIK97_03955 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsn03021
]
NIK97_03955 (rpoB)
03400 DNA repair and recombination proteins [BR:
bpsn03400
]
NIK97_03955 (rpoB)
Enzymes [BR:
bpsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIK97_03955 (rpoB)
Transcription machinery [BR:
bpsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIK97_03955 (rpoB)
DNA repair and recombination proteins [BR:
bpsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIK97_03955 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
UWL60921
UniProt:
A0ABY5UCA2
LinkDB
All DBs
Position
01:complement(797082..801215)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAQTHSFNGRKRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPSGGRPDEGLQAVFK
SVFPIQDFSGASMLEFVRYEFDAPKFDVDECRQRDLTYSAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLF
AARVIPYRGSWLDIEFDSKDIVYARIDRRRKLPATTLLMALGMDGEDILSTFYKTVTYTR
DGDNWRIPYSADRFKGMKIISDLIDADTGEVVLEAGKKLTARSAKQLAEKGLKAIKATED
DLFGSYLAEDVVNYATGEIYLEAGDEIDEKVLKTLLDTGETEIKVLDIDHVNIGAYIRNT
LAVDKNESRQEALFDIYRVMRPGEPPTMDSAEAMFNSLFFDAERYDLSAVGRVKMNMRLD
LDAEDTVRVLRKEDILAVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKVIDGKVTNEVVYLSAMEEAKHSVAQANVELDEQGGFVDEFVICRHAGEVMMAPRENV
DLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIAARRGGVVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQSTCINQRPLV
RVGDRIGKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSEKIVSEDVFTSI
HIEEFEVAARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVHPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLADMIDGKVAAAGPKGFKKGTTISRDLMTEYPRSQWW
QFAVEDEKLQGELEALRSQYDDSKKLLEARFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGELIDVYRKTANIQPLRETLEHIYPDNDRNEPVRSYDDDSVLMLANQVKR
GVSIATPVFDGAVEADINAMLTDAGLATSGQSTLYDGRTGEPFDRQVTMGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELDDTRDAEQPALPDAAE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacccattctttcaatggtcgcaagcgcgtacgcaaatttttcggcaagatc
ccagaggtcgccgagatgccgaaccttattgaggttcagaaggcatcttacgaccagttc
cttatggttgaagaaccatccggcgggcgtcctgacgagggtttgcaggcggttttcaag
tctgttttcccaattcaggatttctccggcgcttcaatgctcgaattcgttcgctacgag
ttcgatgcaccaaaattcgacgttgacgaatgccgtcagcgcgatctgacgtattcggcg
ccactcaaggtgacgctgcgtctcatcgtgttcgatattgacgaagataccggcgcgaag
tcgatcaaggacatcaaggagcaggatgtctacatgggcgacatgccgctcatgaccgac
aacggcacctttatcgtcaacggcaccgagcgcgtgatcgtttcgcagatgcaccgctcg
ccgggcgtcttcttcgatcatgacaagggcaagacccattcgtcgggcaagctcctgttc
gcggctcgcgtcattccttatcgcggttcctggctcgatatcgaattcgattccaaggac
atcgtctacgcgcgtatcgaccgccgccgcaagctgcctgccaccacgctgctgatggcg
cttggcatggacggcgaagacattctgtcgacgttctacaagaccgtcacctatacgcgc
gacggcgacaactggcgcatcccgtattcggctgaccgcttcaagggcatgaagatcatt
tccgatctcatcgatgcggacaccggtgaagtcgttctcgaagctggcaagaagctgacc
gcacgctcggccaagcagcttgccgaaaagggcctcaaggccatcaaggcgacggaagac
gacctgttcggttcgtatcttgcggaagacgtcgtcaattacgcaaccggcgagatctat
ctcgaagccggtgacgaaatcgacgagaaggttctcaagacgctgcttgacaccggcgag
acggaaatcaaggttctcgatatcgaccatgtcaatatcggcgcctatatccgcaatacg
ctggcagtcgacaagaacgaaagccgtcaggaagcgctgttcgacatctatcgcgtcatg
cgtccgggcgaaccgcccacgatggattccgccgaagcgatgttcaactcgctgttcttc
gatgcagagcgttacgacctttcggccgtcggtcgcgtcaagatgaacatgcgtctcgac
ctcgacgcggaagacaccgtgcgcgtgctgcgcaaggaagacatcctggccgtggtcaag
atgctggtggaactgcgcgatggccgcggcgaaatcgacgacatcgacaatctcggcaac
cgccgcgtgcgttcggtcggcgaactgatggaaaatcagtaccgcgtcggtctgctccgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgaaatcgacacggtcatgccgcag
gacctgatcaacgcgaagccggctgccgcagccgttcgcgagttcttcggttcctcgcag
ctgtcgcagttcatggaccagaccaacccgctttcggaaatcacccacaagcgccgtctg
tcggcacttggaccgggcggtctgacccgcgaacgcgccggcttcgaagtccgcgacgtg
catccgacccactatggccgtatctgcccgattgaaacgccggaaggcccgaatatcggt
ctgatcaactcgctcgcaacctttgcccgcgtcaacaagtacggctttattgaaagcccg
taccgcaaggtgatcgacggcaaggtaacgaacgaggtcgtctatctgtcggccatggaa
gaagccaagcactcggtggcacaggctaacgttgagctggacgagcagggcggtttcgtc
gacgaattcgtcatctgccgtcatgcaggcgaagtgatgatggctccgcgtgaaaacgtg
gacctgatggacgtctcgccgaaacagctcgtttcggttgcagcggctctgatcccgttc
ctggaaaacgacgacgccaaccgcgcgctcatgggctcgaacatgcagcgtcaggctgtg
ccgctcgtccgcgccgaagcgccgttcgtcggcaccggcatggagccgatcgttgctcgc
gactccggtgcagcaatcgctgcccgccgcggcggtgtggtcgatcaggtcgatgcgacc
cgtatcgttatccgcgccacggaagatctcgatccgtccaagtcgggcgtcgatatctat
cgtctgcagaagttccagcgttcgaaccagtcgacctgcatcaaccagcgtccgctcgtt
cgcgttggcgaccgcatcggcaagggcgacatcattgctgacggtccgtccacggatctg
ggcgatctggctcttggccgcaacgtgctcgtcgcgttcatgccgtggaacggctacaac
tacgaagactcgatcctgctttccgagaagatcgtttcggaagacgtgttcacctcgatc
catatcgaggaattcgaagttgccgcccgcgacaccaagcttggacctgaggaaatcacc
cgcgatattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggtatcgtc
tacatcggtgcggaagtgcatcctggcgacattctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgctatcttcggtgaaaaggcatcg
gacgttcgtgacacctccatgcgtatgccgcccggaacctacggtacggttgtggaagtt
cgcgttttcaatcgccacggcgttgaaaaggacgaacgcgccatggctatcgagcgcgag
gaaatcgagcgtcttgccaaggaccgtgacgacgaacaggcgatcctggatcgcaacgtc
tatggccgtctcgccgacatgatcgacggtaaggtcgccgctgccgggccgaagggcttc
aagaagggcacgacgatcagccgcgatctcatgacggagtatccgcggtcgcaatggtgg
cagtttgccgttgaagacgaaaagcttcagggcgagctggaagctctgcgcagccagtat
gacgactccaagaagctgctcgaagcacgcttcatggacaaggtcgaaaaggtccagcgt
ggcgacgagatgcctccgggcgtcatgaagatggtcaaggtctttgtcgctgtgaagcgc
aagatccagccaggcgacaagatggctggccgtcacggcaacaagggtgtggtttcgcgc
attctgccggtggaagacatgccgttcctggaagacggtacgcatgccgacatcgtgttg
aacccgcttggcgttccaagccgaatgaatgtgggccagattctggaaacccaccttggc
tgggcatgtgccggcatgggcaagaagatcggtgagctcatcgacgtttatcgcaagacg
gccaatattcagccgctgcgtgaaacgctggagcacatctatccggacaacgaccgcaac
gaaccggtccggtcttatgacgacgattccgtcctcatgctggccaaccaggtgaagcgc
ggcgtgtcgatcgcaacgccggtcttcgacggtgcggttgaagccgacatcaatgcgatg
ctgacggatgccggacttgcaacgtctggtcagtcgacgctttacgatggccgtacgggt
gagccgttcgaccgtcaggtgaccatgggctacatctatatgctgaagctccaccacctg
gtcgacgacaagatccacgcgcgttcgatcggaccttactcgctcgtcacgcagcagcct
ctgggcggcaaggcccagttcggcggccagcgcttcggcgaaatggaggtctgggcactg
gaagcatacggtgcagcatacacgctgcaggaaatgcttaccgtcaagtcggacgacgtt
gcaggccgtaccaaggtctacgaagccatcgtgcgcggcgacgacacgttcgaggcaggc
attccggagagcttcaacgttctcgtcaaggaaatgcgctcgctcggcctcaatgtcgaa
ctcgacgacacgcgtgacgctgaacagccggccctgccggacgcggcggaataa
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integrated database retrieval system
