Burkholderia pseudomallei A79A: X996_5268
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Entry
X996_5268 CDS
T03498
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpso
Burkholderia pseudomallei A79A
Pathway
bpso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
X996_5268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpso03400
]
X996_5268
Enzymes [BR:
bpso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
X996_5268
DNA repair and recombination proteins [BR:
bpso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
X996_5268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIV94102
LinkDB
All DBs
Position
2:complement(2325643..2326299)
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AA seq
218 aa
AA seq
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MARDARAAHSPRRRRAADDDDAPQTLDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPG
NQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEI
DACRYWLERELDALGPRVVVALGAIALKAVLDDRHARLQSAMGVVQSAGGRYVIATYHPS
FVLRVPDPDARKRAYAAIVEACRVAHELAQRTDGAPRP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgacgctcgcgccgcgcattcgccgcgccgccgccgtgcggcggacgacgac
gacgcgccgcagacgctcgatgcgtgccgccgttgcgggctctgggagcacgcgacgcag
gcggtgcccggcgcgggcccgccgcgcgcggcgatcatgctcgtcggcgaacagccgggc
aatcaggaagaccgcgagggcgcgccgttcgtcggcccggccgggcgcgtgctcgagcgc
gcgctcgcggcggcggggctcgaccgcgcgagcgtctacgtgacgaacgcggtcaagcac
ttcaaatgggcgccgcgcggcaagcggcggatgcacaagacgcccgcgcagcaggaaatc
gatgcgtgccggtattggctcgagcgcgaactggacgcgctcgggccgcgcgtcgtcgtc
gcgctcggggccatcgcgctgaaggccgtgctcgacgatcgccacgcgcggctgcagtcc
gcgatgggcgtcgtgcaatcggcgggcggccgctatgtgatcgcaacctaccacccgtcg
ttcgtgctgcgcgtgcccgatcccgacgcgcgcaagcgcgcgtacgcggcgatcgtcgaa
gcgtgccgcgtcgcgcacgagctcgcgcagcgcacggacggcgcaccccggccctga
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